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Open data
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Basic information
Entry | Database: PDB / ID: 6iha | ||||||
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Title | antibacterial peptide SibaCec-A | ||||||
![]() | SibaCec-A | ||||||
![]() | ANTITOXIN / antibacterial peptide / alpha-helix | ||||||
Function / homology | Cecropin 4![]() | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / DGSA-distance geometry simulated annealing | ||||||
![]() | Jing, H. / Lin, W. | ||||||
![]() | ![]() Title: antibacterial peptide SibaCec-A Authors: Jing, H. / Lin, W. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 183.6 KB | Display | ![]() |
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PDB format | ![]() | 153.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 358 KB | Display | ![]() |
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Full document | ![]() | 406.7 KB | Display | |
Data in XML | ![]() | 11.5 KB | Display | |
Data in CIF | ![]() | 18.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | |
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Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 3114.813 Da / Num. of mol.: 1 / Source method: obtained synthetically / Source: (synth.) ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details | Type: solution / Contents: 3.0 mM peptide, trifluoroethanol/water / Label: sample / Solvent system: trifluoroethanol/water |
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Sample | Conc.: 3.0 mM / Component: peptide / Isotopic labeling: natural abundance |
Sample conditions | Ionic strength: 0 M / Label: TFE / pH: 7.0 / Pressure: 1 atm / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker AVANCE III / Manufacturer: Bruker / Model: AVANCE III / Field strength: 850 MHz |
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Processing
NMR software |
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Refinement | Method: DGSA-distance geometry simulated annealing / Software ordinal: 1 | |||||||||||||||
NMR representative | Selection criteria: lowest energy | |||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 200 / Conformers submitted total number: 20 |