Entry | Database: PDB / ID: 6i33 |
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Title | Crystal structure of human glycine decarboxylase (P-protein) |
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Components | Glycine dehydrogenase (decarboxylating), mitochondrial |
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Keywords | OXIDOREDUCTASE / mitochondrial / glycine decarboxylase / glycine cleavage system P-protein |
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Function / homology | Function and homology information
response to methylamine / response to lipoic acid / glycine dehydrogenase (aminomethyl-transferring) / pyridoxal binding / glycine dehydrogenase (decarboxylating) activity / glycine catabolic process / Glycine degradation / glycine cleavage complex / glycine decarboxylation via glycine cleavage system / glycine binding ...response to methylamine / response to lipoic acid / glycine dehydrogenase (aminomethyl-transferring) / pyridoxal binding / glycine dehydrogenase (decarboxylating) activity / glycine catabolic process / Glycine degradation / glycine cleavage complex / glycine decarboxylation via glycine cleavage system / glycine binding / cellular response to leukemia inhibitory factor / pyridoxal phosphate binding / electron transfer activity / lyase activity / mitochondrial matrix / protein homodimerization activity / mitochondrion / nucleoplasm / plasma membrane / cytosolSimilarity search - Function Glycine dehydrogenase (decarboxylating) / Glycine cleavage system P protein / : / : / Glycine cleavage system P-protein / Glycine dehydrogenase, C-terminal domain / Aromatic amino acid beta-eliminating lyase/threonine aldolase / Beta-eliminating lyase / Pyridoxal phosphate-dependent transferase, small domain / Pyridoxal phosphate-dependent transferase, major domain / Pyridoxal phosphate-dependent transferaseSimilarity search - Domain/homology |
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Biological species | Homo sapiens (human) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.3 Å |
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Authors | Van Laer, B. / Kapp, U. / Leonard, G. / Mueller-Dieckmann, C. |
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Citation | Journal: To Be Published Title: Structural insights in human glycine decarboxylase and comparison with the Neanderthal variant Authors: Van Laer, B. / Kapp, U. / Signor, L. / Leonard, G. / Mueller-Dieckmann, C. |
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History | Deposition | Nov 5, 2018 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Nov 20, 2019 | Provider: repository / Type: Initial release |
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Revision 1.1 | Jan 15, 2020 | Group: Advisory / Derived calculations Category: pdbx_unobs_or_zero_occ_atoms / pdbx_validate_close_contact / struct_conn |
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Revision 1.2 | Jan 24, 2024 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn / struct_ncs_dom_lim Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_dist_value / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id |
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