Entry Database : PDB / ID : 6g11 Structure visualization Downloads & linksTitle Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikE with the HMA domain of Pikp-1 from rice (Oryza sativa) ComponentsAVR-Pik protein Resistance protein Pikp-1 DetailsKeywords ANTIFUNGAL PROTEIN / Plant NLR / fungal effector / Plant immunity / ComplexFunction / homology Function and homology informationFunction Domain/homology Component
Rx, N-terminal / Rx N-terminal domain / Disease resistance protein, plants / NB-ARC / NB-ARC domain / Heavy-metal-associated domain profile. / Heavy metal-associated domain, HMA / Alpha-Beta Plaits - #100 / Leucine-rich repeat, typical subtype / Leucine-rich repeats, typical (most populated) subfamily ... Rx, N-terminal / Rx N-terminal domain / Disease resistance protein, plants / NB-ARC / NB-ARC domain / Heavy-metal-associated domain profile. / Heavy metal-associated domain, HMA / Alpha-Beta Plaits - #100 / Leucine-rich repeat, typical subtype / Leucine-rich repeats, typical (most populated) subfamily / Leucine-rich repeat domain superfamily / Alpha-Beta Plaits / Winged helix-like DNA-binding domain superfamily / ATPases associated with a variety of cellular activities / AAA+ ATPase domain / P-loop containing nucleoside triphosphate hydrolase / 2-Layer Sandwich / Alpha Beta Similarity search - Domain/homologyBiological species Magnaporthe oryzae (rice blast fungus)Oryza sativa subsp. japonica (Japanese rice)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.9 Å DetailsAuthors De la Concepcion, J.C. / Franceschetti, M. / Banfield, M.J. Funding support United Kingdom, Japan, 5items Details Hide detailsOrganization Grant number Country Biotechnology and Biological Sciences Research Council BB/J00453 United Kingdom Biotechnology and Biological Sciences Research Council BB/P012574 United Kingdom Biotechnology and Biological Sciences Research Council BB/M02198X United Kingdom European Research Council 743165 Japan Society for the Promotion of Science KAKENHI 15H05779 Japan
CitationJournal : Nat Plants / Year : 2018Title : Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.Authors : De la Concepcion, J.C. / Franceschetti, M. / Maqbool, A. / Saitoh, H. / Terauchi, R. / Kamoun, S. / Banfield, M.J. History Deposition Mar 20, 2018 Deposition site : PDBE / Processing site : PDBERevision 1.0 Jun 13, 2018 Provider : repository / Type : Initial releaseRevision 1.1 Jul 18, 2018 Group : Data collection / Database references / Category : citationItem : _citation.country / _citation.journal_abbrev ... _citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year Revision 1.2 Aug 15, 2018 Group : Data collection / Database references / Category : citation / citation_authorItem : _citation.journal_volume / _citation.page_first ... _citation.journal_volume / _citation.page_first / _citation.page_last / _citation_author.identifier_ORCID Revision 1.3 Jan 17, 2024 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_alt_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
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