Entry | Database: PDB / ID: 6et7 |
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Title | Activated heterodimer of the bacteriophytochrome regulated diguanylyl cyclase variant - S505V A526V - from Idiomarina species A28L |
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Components | Diguanylate cyclase (GGDEF) domain-containing protein |
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Keywords | TRANSFERASE / red light / phytochrome / GGDEF / asymmetry |
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Function / homology | Function and homology information
diguanylate cyclase / negative regulation of bacterial-type flagellum-dependent cell motility / diguanylate cyclase activity / detection of visible light / cell adhesion involved in single-species biofilm formation / photoreceptor activity / regulation of DNA-templated transcription / GTP binding / metal ion binding / plasma membraneSimilarity search - Function Phytochrome / Phytochrome, PHY domain superfamily / PAS fold-2 / PAS fold / Phytochrome, central region / Phytochrome region / Diguanylate cyclase, GGDEF domain / diguanylate cyclase / Phytochrome chromophore attachment domain / Phytochrome chromophore attachment site domain profile. ...Phytochrome / Phytochrome, PHY domain superfamily / PAS fold-2 / PAS fold / Phytochrome, central region / Phytochrome region / Diguanylate cyclase, GGDEF domain / diguanylate cyclase / Phytochrome chromophore attachment domain / Phytochrome chromophore attachment site domain profile. / GGDEF domain profile. / GGDEF domain / Nucleotide cyclase / GAF domain / Domain present in phytochromes and cGMP-specific phosphodiesterases. / GAF domain / GAF-like domain superfamily / PAS domain superfamily / Reverse transcriptase/Diguanylate cyclase domainSimilarity search - Domain/homology |
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Biological species | Idiomarina sp. A28L (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 2.852 Å |
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Authors | Gourinchas, G. / Winkler, A. |
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Funding support | Austria, 1items Organization | Grant number | Country |
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Austrian Science Fund | P27124 | Austria |
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Citation | Journal: Elife / Year: 2018 Title: Asymmetric activation mechanism of a homodimeric red light regulated photoreceptor. Authors: Gourinchas, G. / Heintz, U. / Winkler, A. |
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History | Deposition | Oct 25, 2017 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Jun 13, 2018 | Provider: repository / Type: Initial release |
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Revision 1.1 | Jan 17, 2024 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description / Structure summary Category: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / entity / pdbx_entity_nonpoly / pdbx_initial_refinement_model / struct_ncs_dom_lim Item: _chem_comp.name / _database_2.pdbx_DOI ..._chem_comp.name / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id |
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