登録情報 データベース : PDB / ID : 5yc5 構造の表示 ダウンロードとリンクタイトル Crystal structure of human IgG-Fc in complex with aglycan and optimized Fc gamma receptor IIIa 要素Immunoglobulin gamma-1 heavy chain Low affinity immunoglobulin gamma Fc region receptor III-A 詳細キーワード IMMUNE SYSTEM / Immunoglobulin G / Fc receptor / Affinity chromatography / Protein glycosylation / Calorimetry / Protein dynamics機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
low-affinity IgG receptor activity / immune receptor activity / natural killer cell degranulation / IgG receptor activity / Fc-gamma receptor III complex / Fc-gamma receptor signaling pathway / macrophage activation / positive regulation of natural killer cell proliferation / natural killer cell activation / antibody-dependent cellular cytotoxicity ... low-affinity IgG receptor activity / immune receptor activity / natural killer cell degranulation / IgG receptor activity / Fc-gamma receptor III complex / Fc-gamma receptor signaling pathway / macrophage activation / positive regulation of natural killer cell proliferation / natural killer cell activation / antibody-dependent cellular cytotoxicity / IgG binding / immunoglobulin complex / natural killer cell mediated cytotoxicity / FCGR activation / Role of phospholipids in phagocytosis / FCGR3A-mediated IL10 synthesis / phosphatidylinositol 3-kinase/protein kinase B signal transduction / FCGR3A-mediated phagocytosis / calcium-mediated signaling / Regulation of actin dynamics for phagocytic cup formation / Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell / positive regulation of tumor necrosis factor production / adaptive immune response / cell surface receptor signaling pathway / immune response / external side of plasma membrane / extracellular space / extracellular exosome / extracellular region / plasma membrane 類似検索 - 分子機能 : / Immunoglobulin domain / : / Immunoglobulin V-Type / Immunoglobulin V-set domain / Immunoglobulin V-set domain / Immunoglobulin subtype / Immunoglobulin / Immunoglobulin/major histocompatibility complex, conserved site / Immunoglobulins and major histocompatibility complex proteins signature. ... : / Immunoglobulin domain / : / Immunoglobulin V-Type / Immunoglobulin V-set domain / Immunoglobulin V-set domain / Immunoglobulin subtype / Immunoglobulin / Immunoglobulin/major histocompatibility complex, conserved site / Immunoglobulins and major histocompatibility complex proteins signature. / Immunoglobulin C-Type / Immunoglobulin C1-set / Immunoglobulin C1-set domain / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulin-like fold / Immunoglobulins / Immunoglobulin-like / Sandwich / Mainly Beta 類似検索 - ドメイン・相同性 Low affinity immunoglobulin gamma Fc region receptor III-A / Immunoglobulin gamma-1 heavy chain 類似検索 - 構成要素生物種 Homo sapiens (ヒト)手法 X線回折 / シンクロトロン / 分子置換 / 解像度 : 2.71 Å 詳細データ登録者 Caaveiro, J.M.M. / Tamura, H. / Tsumoto, K. / Kiyoshi, M. 資金援助 日本, 3件 詳細 詳細を隠す組織 認可番号 国 Japan Society for the Promotion of Science 25249115 日本 Japan Agency for Medical Research and Development (AMED) Research on Regulatory Science of 427 Pharmaceuticals and Medical Devices 日本 Japan Society for the Promotion of Science 15K06962 日本
引用ジャーナル : Sci Rep / 年 : 2018タイトル : Assessing the Heterogeneity of the Fc-Glycan of a Therapeutic Antibody Using an engineered Fc gamma Receptor IIIa-Immobilized Column.著者: Kiyoshi, M. / Caaveiro, J.M.M. / Tada, M. / Tamura, H. / Tanaka, T. / Terao, Y. / Morante, K. / Harazono, A. / Hashii, N. / Shibata, H. / Kuroda, D. / Nagatoishi, S. / Oe, S. / Ide, T. / ... 著者 : Kiyoshi, M. / Caaveiro, J.M.M. / Tada, M. / Tamura, H. / Tanaka, T. / Terao, Y. / Morante, K. / Harazono, A. / Hashii, N. / Shibata, H. / Kuroda, D. / Nagatoishi, S. / Oe, S. / Ide, T. / Tsumoto, K. / Ishii-Watabe, A. 履歴 登録 2017年9月6日 登録サイト : PDBJ / 処理サイト : PDBJ改定 1.0 2018年3月21日 Provider : repository / タイプ : Initial release改定 1.1 2018年7月4日 Group : Data collection / Database references / カテゴリ : struct_ref_seq_dif / Item : _struct_ref_seq_dif.details改定 2.0 2020年7月29日 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Structure summary カテゴリ : atom_site / atom_site_anisotrop ... atom_site / atom_site_anisotrop / chem_comp / entity / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / pdbx_struct_mod_residue / struct_asym / struct_conn / struct_site / struct_site_gen Item : _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ... _atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.type_symbol / _atom_site_anisotrop.U[1][1] / _atom_site_anisotrop.U[1][2] / _atom_site_anisotrop.U[1][3] / _atom_site_anisotrop.U[2][2] / _atom_site_anisotrop.U[2][3] / _atom_site_anisotrop.U[3][3] / _atom_site_anisotrop.id / _atom_site_anisotrop.pdbx_auth_asym_id / _atom_site_anisotrop.pdbx_auth_atom_id / _atom_site_anisotrop.pdbx_auth_comp_id / _atom_site_anisotrop.pdbx_auth_seq_id / _atom_site_anisotrop.pdbx_label_asym_id / _atom_site_anisotrop.pdbx_label_atom_id / _atom_site_anisotrop.pdbx_label_comp_id / _atom_site_anisotrop.type_symbol / _chem_comp.name / _chem_comp.type / _pdbx_struct_assembly_gen.asym_id_list / _pdbx_struct_mod_residue.auth_asym_id / _pdbx_struct_mod_residue.auth_seq_id / _pdbx_struct_mod_residue.label_asym_id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.pdbx_role / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_comp_id 解説 : Carbohydrate remediation / Provider : repository / タイプ : Remediation改定 2.1 2023年11月22日 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description / Structure summary カテゴリ : chem_comp / chem_comp_atom ... chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn Item : _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ... _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_leaving_atom_flag 改定 2.2 2024年11月13日 Group : Structure summaryカテゴリ : pdbx_entry_details / pdbx_modification_feature
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