Entry Database : PDB / ID : 5i4a Structure visualization Downloads & linksTitle X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA ComponentsArgonaute protein RNA (5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*U)-3') DetailsKeywords RNA BINDING PROTEIN/RNA / Argonaute / 5' OH / Guide RNA / RNA BINDING PROTEIN-RNA complexFunction / homology Function and homology informationFunction Domain/homology Component
Hydrolases; Acting on ester bonds; Site specific endodeoxyribonucleases: cleavage is not sequence specific (deleted sub-subclass) / DNA endonuclease activity / DNA binding / RNA binding / metal ion binding / cytoplasm Similarity search - Function : / : / Bacterial argonaute protein N-terminal domain / Argonaute, middle domain, bacteria / Piwi domain / Piwi / Ribonuclease H superfamily / Ribonuclease H-like superfamily Similarity search - Domain/homologyBiological species Marinitoga piezophila (bacteria)synthetic construct (others) Method X-RAY DIFFRACTION / SYNCHROTRON / MAD / Resolution : 1.949 Å DetailsAuthors Doxzen, K.W. / Kaya, E. / Knoll, K.R. / Wilson, R.C. / Strutt, S.C. / Kranzusch, P.J. / Doudna, J.A. Funding support United States, 1items Details Hide detailsOrganization Grant number Country Howard Hughes Medical Institute (HHMI) United States
CitationJournal : Proc.Natl.Acad.Sci.USA / Year : 2016Title : A bacterial Argonaute with noncanonical guide RNA specificity.Authors : Kaya, E. / Doxzen, K.W. / Knoll, K.R. / Wilson, R.C. / Strutt, S.C. / Kranzusch, P.J. / Doudna, J.A. History Deposition Feb 11, 2016 Deposition site : RCSB / Processing site : RCSBRevision 1.0 Mar 30, 2016 Provider : repository / Type : Initial releaseRevision 1.1 Apr 13, 2016 Group : Database referencesRevision 1.2 Jun 15, 2016 Group : Database referencesRevision 1.3 Jul 6, 2016 Group : Data collectionRevision 1.4 Nov 20, 2019 Group : Author supporting evidence / Derived calculations / Category : pdbx_audit_support / pdbx_struct_oper_listItem : _pdbx_audit_support.funding_organization / _pdbx_struct_oper_list.symmetry_operationRevision 1.5 Mar 6, 2024 Group : Data collection / Database references / Category : chem_comp_atom / chem_comp_bond / database_2Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession
Show all Show less