LYSINE-SPECIFICDEMETHYLASE4A / JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3A / JUMONJI DOMAIN-CONTAINING PROTEIN 2A
Mass: 44326.273 Da / Num. of mol.: 2 / Fragment: RESIDUES 4-354 Source method: isolated from a genetically manipulated source Source: (gene. exp.) HOMO SAPIENS (human) / Plasmid: PNIC28-BSA4 / Production host: ESCHERICHIA COLI (E. coli) / Strain (production host): BL21(DE3) References: UniProt: O75164, Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
Resolution: 2.343→28.98 Å / σ(F): 1.34 / Stereochemistry target values: ML Details: SOME RESIDUE SIDECHAINS ARE IN DUAL CONFORMATION. SOME RESIDUES DO NOT HAVE SIDECHAINS.
Rfactor
Num. reflection
% reflection
Rfree
0.2294
1758
4.8 %
Rwork
0.1851
-
-
obs
0.1873
36843
99.7 %
Refinement step
Cycle: LAST / Resolution: 2.343→28.98 Å
Protein
Nucleic acid
Ligand
Solvent
Total
Num. atoms
5568
0
66
196
5830
LS refinement shell
Resolution (Å)
Rfactor Rfree
Num. reflection Rfree
Rfactor Rwork
Num. reflection Rwork
Refine-ID
% reflection obs (%)
2.3428-2.4061
0.3618
123
0.2717
2573
X-RAY DIFFRACTION
97
2.4061-2.4769
0.3417
134
0.2527
2682
X-RAY DIFFRACTION
100
2.4769-2.5568
0.2904
126
0.2456
2635
X-RAY DIFFRACTION
100
2.5568-2.6481
0.3005
151
0.2485
2668
X-RAY DIFFRACTION
100
2.6481-2.7541
0.2867
130
0.2272
2666
X-RAY DIFFRACTION
100
2.7541-2.8793
0.312
124
0.2266
2706
X-RAY DIFFRACTION
100
2.8793-3.031
0.2716
125
0.2212
2683
X-RAY DIFFRACTION
100
3.031-3.2206
0.2701
138
0.2113
2695
X-RAY DIFFRACTION
100
3.2206-3.4689
0.255
135
0.1997
2696
X-RAY DIFFRACTION
100
3.4689-3.8173
0.2272
158
0.1862
2698
X-RAY DIFFRACTION
100
3.8173-4.3681
0.183
144
0.1549
2729
X-RAY DIFFRACTION
100
4.3681-5.4972
0.1691
121
0.1389
2766
X-RAY DIFFRACTION
100
5.4972-28.9818
0.198
149
0.161
2888
X-RAY DIFFRACTION
100
+
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