登録情報 | データベース: PDB / ID: 5drv |
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タイトル | Crystal structure of the G3BP2 NTF2-like domain in complex with a peptide |
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要素 | - Non-structural protein 3
- Ras GTPase-activating protein-binding protein 2
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キーワード | PROTEIN BINDING / NTF2-like / G3BP / peptide complex |
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機能・相同性 | 機能・相同性情報
positive regulation of stress granule assembly / cytoplasmic sequestering of NF-kappaB / host cell filopodium / ADP-ribose 1''-phosphate phosphatase / mRNA methyltransferase activity / mRNA 5'-triphosphate monophosphatase activity / mRNA 5'-phosphatase / polynucleotide 5'-phosphatase activity / polynucleotide adenylyltransferase / poly(A) RNA polymerase activity ...positive regulation of stress granule assembly / cytoplasmic sequestering of NF-kappaB / host cell filopodium / ADP-ribose 1''-phosphate phosphatase / mRNA methyltransferase activity / mRNA 5'-triphosphate monophosphatase activity / mRNA 5'-phosphatase / polynucleotide 5'-phosphatase activity / polynucleotide adenylyltransferase / poly(A) RNA polymerase activity / symbiont-mediated suppression of host mRNA transcription via inhibition of RNA polymerase II activity / 7-methylguanosine mRNA capping / mRNA transport / stress granule assembly / cysteine-type peptidase activity / symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT1 activity / viral process / 転移酵素; 一炭素原子の基を移すもの; メチル基を移すもの / host cell cytoplasmic vesicle membrane / protein homooligomerization / cytoplasmic stress granule / 転移酵素; リンを含む基を移すもの; 核酸を移すもの / signaling receptor complex adaptor activity / nucleoside-triphosphate phosphatase / Ras protein signal transduction / 加水分解酵素; プロテアーゼ; ペプチド結合加水分解酵素; システインプロテアーゼ / RNA helicase activity / symbiont-mediated suppression of host type I interferon-mediated signaling pathway / RNA helicase / ribonucleoprotein complex / RNA-directed RNA polymerase / viral RNA genome replication / RNA-dependent RNA polymerase activity / innate immune response / virus-mediated perturbation of host defense response / DNA-templated transcription / mRNA binding / host cell nucleus / GTP binding / host cell plasma membrane / ATP hydrolysis activity / proteolysis / RNA binding / ATP binding / membrane / metal ion binding / cytoplasm / cytosol類似検索 - 分子機能 G3BP2, RNA recognition motif / Ras GTPase-activating protein-binding protein 2 / Ras GTPase-activating protein-binding protein / Nuclear transport factor 2, eukaryote / Nuclear transport factor 2 domain profile. / Nuclear transport factor 2 domain / Nuclear transport factor 2 (NTF2) domain / : / : / : ...G3BP2, RNA recognition motif / Ras GTPase-activating protein-binding protein 2 / Ras GTPase-activating protein-binding protein / Nuclear transport factor 2, eukaryote / Nuclear transport factor 2 domain profile. / Nuclear transport factor 2 domain / Nuclear transport factor 2 (NTF2) domain / : / : / : / Non-structural protein 3, zinc-binding domain / Tomato mosaic virus helicase, N-terminal domain / Alphavirus nsP2 protease domain superfamily / Alphavirus nsp2 protease (nsp2pro) domain / Peptidase family C9 / Alphavirus nsp2 protease (nsp2pro) domain profile. / Viral methyltransferase / Alphavirus-like methyltransferase (MT) domain / Alphavirus-like methyltransferase (MT) domain profile. / Tymovirus, RNA-dependent RNA polymerase / RNA dependent RNA polymerase / Viral (Superfamily 1) RNA helicase / Nuclear Transport Factor 2; Chain: A, - #50 / NTF2-like domain superfamily / Nuclear Transport Factor 2; Chain: A, / RNA recognition motif / RNA recognition motif / Eukaryotic RNA Recognition Motif (RRM) profile. / RNA recognition motif domain / RNA-binding domain superfamily / (+) RNA virus helicase core domain / (+)RNA virus helicase core domain profile. / Non-structural protein 3, X-domain-like / Macro domain / Appr-1"-p processing enzyme / Macro domain / Macro domain profile. / Macro domain-like / Nucleotide-binding alpha-beta plait domain superfamily / RNA-directed RNA polymerase, catalytic domain / RdRp of positive ssRNA viruses catalytic domain profile. / S-adenosyl-L-methionine-dependent methyltransferase superfamily / Roll / DNA/RNA polymerase superfamily / P-loop containing nucleoside triphosphate hydrolase / Alpha Beta類似検索 - ドメイン・相同性 Polyprotein P1234 / Ras GTPase-activating protein-binding protein 2類似検索 - 構成要素 |
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生物種 | Homo sapiens (ヒト)
![](img/tx_virus.gif) Semliki forest virus (セムリキ森林ウイルス) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.75 Å |
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データ登録者 | Kristensen, O. |
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資金援助 | デンマーク, 3件 組織 | 認可番号 | 国 |
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Alfred Benzon Foundation | | デンマーク | Brdr. Hartmann Foundation | | デンマーク | the Danish Natural Science Council (DANSCATT) | | デンマーク |
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引用 | ジャーナル: Biochem.Biophys.Res.Commun. / 年: 2015 タイトル: Crystal structure of the G3BP2 NTF2-like domain in complex with a canonical FGDF motif peptide. 著者: Kristensen, O. |
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履歴 | 登録 | 2015年9月16日 | 登録サイト: RCSB / 処理サイト: PDBE |
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改定 1.0 | 2015年10月14日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2015年10月28日 | Group: Database references |
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改定 1.2 | 2024年1月10日 | Group: Data collection / Database references / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession |
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