Entry Database : PDB / ID : 4v2s Structure visualization Downloads & linksTitle Crystal structure of Hfq in complex with the sRNA RydC ComponentsRNA-BINDING PROTEIN HFQ RYDC DetailsKeywords RNA BINDING PROTEIN/RNA / RNA BINDING PROTEIN-RNA COMPLEX / NATIVELY UNSTRUCTURED PROTEIN / PROTEIN-RNA RECOGNITIONFunction / homology Function and homology informationFunction Domain/homology Component
sRNA-mediated post-transcriptional gene silencing / positive regulation of translation, ncRNA-mediated / RNA folding chaperone / regulation of translation, ncRNA-mediated / bent DNA binding / regulation of RNA stability / regulation of DNA-templated transcription / DNA binding / RNA binding / cytosol Similarity search - Function RNA-binding protein Hfq / Hfq protein / SH3 type barrels. - #100 / : / Sm domain profile. / LSM domain superfamily / SH3 type barrels. / Roll / Mainly Beta Similarity search - Domain/homologyBiological species ESCHERICHIA COLI (E. coli)SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM (bacteria)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 3.48 Å DetailsAuthors Dimastrogiovanni, D. / Frohlich, K.S. / Bruce, H.A. / Bandyra, K.J. / Hohensee, S. / Vogel, J. / Luisi, B.F. CitationJournal : Elife / Year : 2014Title : Recognition of the small regulatory RNA RydC by the bacterial Hfq protein.Authors : Dimastrogiovanni, D. / Frohlich, K.S. / Bandyra, K.J. / Bruce, H.A. / Hohensee, S. / Vogel, J. / Luisi, B.F. History Deposition Oct 14, 2014 Deposition site : PDBE / Processing site : PDBERevision 1.0 Jan 14, 2015 Provider : repository / Type : Initial releaseRevision 1.1 Feb 27, 2019 Group : Data collection / Database references / OtherCategory : citation / pdbx_database_proc / pdbx_database_statusItem : _citation.pdbx_database_id_DOI / _citation.title / _pdbx_database_status.recvd_author_approvalRevision 1.2 Jan 10, 2024 Group : Data collection / Database references ... Data collection / Database references / Other / Refinement description Category : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_database_status / pdbx_initial_refinement_model / struct_ncs_dom_lim Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.status_code_sf / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
Show all Show less Remark 700 SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW ... SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 30-STRANDED BARREL THIS IS REPRESENTED BY A 31-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL.