Deposited unit | A: Ribosomal protein S12 methylthiotransferase accessory factor YcaO B: Ribosomal protein S12 methylthiotransferase accessory factor YcaO C: Ribosomal protein S12 methylthiotransferase accessory factor YcaO D: Ribosomal protein S12 methylthiotransferase accessory factor YcaO E: Ribosomal protein S12 methylthiotransferase accessory factor YcaO F: Ribosomal protein S12 methylthiotransferase accessory factor YcaO G: Ribosomal protein S12 methylthiotransferase accessory factor YcaO H: Ribosomal protein S12 methylthiotransferase accessory factor YcaO hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 528,558 | 36 |
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Polymers | 525,617 | 8 |
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Non-polymers | 2,941 | 28 |
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Water | 35,796 | 1987 |
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1 | A: Ribosomal protein S12 methylthiotransferase accessory factor YcaO B: Ribosomal protein S12 methylthiotransferase accessory factor YcaO hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 132,244 | 10 |
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Polymers | 131,404 | 2 |
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Non-polymers | 840 | 8 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 5280 Å2 |
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ΔGint | -70 kcal/mol |
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Surface area | 45680 Å2 |
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Method | PISA |
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2 | C: Ribosomal protein S12 methylthiotransferase accessory factor YcaO D: Ribosomal protein S12 methylthiotransferase accessory factor YcaO hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 132,244 | 10 |
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Polymers | 131,404 | 2 |
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Non-polymers | 840 | 8 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 5240 Å2 |
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ΔGint | -72 kcal/mol |
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Surface area | 45410 Å2 |
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Method | PISA |
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3 | E: Ribosomal protein S12 methylthiotransferase accessory factor YcaO F: Ribosomal protein S12 methylthiotransferase accessory factor YcaO hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 131,824 | 6 |
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Polymers | 131,404 | 2 |
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Non-polymers | 420 | 4 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 4200 Å2 |
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ΔGint | -42 kcal/mol |
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Surface area | 45610 Å2 |
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Method | PISA |
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4 | G: Ribosomal protein S12 methylthiotransferase accessory factor YcaO H: Ribosomal protein S12 methylthiotransferase accessory factor YcaO hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 132,244 | 10 |
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Polymers | 131,404 | 2 |
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Non-polymers | 840 | 8 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 5300 Å2 |
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ΔGint | -71 kcal/mol |
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Surface area | 45270 Å2 |
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Method | PISA |
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Unit cell | Length a, b, c (Å) | 111.254, 112.949, 132.886 |
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Angle α, β, γ (deg.) | 89.94, 73.51, 77.23 |
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Int Tables number | 1 |
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Space group name H-M | P1 |
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Noncrystallographic symmetry (NCS) | NCS domain: ID | Ens-ID | Details |
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1 | 1 | A2 | 1 | B1 | 2 | A2 | 2 | C1 | 3 | A2 | 3 | D1 | 4 | A2 | 4 | E1 | 5 | A2 | 5 | F1 | 6 | A2 | 6 | G1 | 7 | A2 | 7 | H1 | 8 | B2 | 8 | C1 | 9 | B2 | 9 | D1 | 10 | B2 | 10 | E1 | 11 | B2 | 11 | F1 | 12 | B2 | 12 | G1 | 13 | B2 | 13 | H1 | 14 | C2 | 14 | D1 | 15 | C2 | 15 | E1 | 16 | C2 | 16 | F1 | 17 | C2 | 17 | G1 | 18 | C2 | 18 | H1 | 19 | D2 | 19 | E1 | 20 | D2 | 20 | F1 | 21 | D2 | 21 | G1 | 22 | D2 | 22 | H1 | 23 | E2 | 23 | F1 | 24 | E2 | 24 | G1 | 25 | E2 | 25 | H1 | 26 | F2 | 26 | G1 | 27 | F2 | 27 | H1 | 28 | G2 | 28 | H | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
NCS domain segments: Component-ID: _ / Refine code: _ Dom-ID | Ens-ID | Beg auth comp-ID | Beg label comp-ID | End auth comp-ID | End label comp-ID | Auth asym-ID | Label asym-ID | Auth seq-ID | Label seq-ID |
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1 | 1 | THRTHRALAALAAA2 - 582 | 2 - 582 | 2 | 1 | THRTHRALAALABB2 - 582 | 2 - 582 | 1 | 2 | ALAALALYSLYSAA12 - 580 | 12 - 580 | 2 | 2 | ALAALALYSLYSCC12 - 580 | 12 - 580 | 1 | 3 | THRTHRPHEPHEAA2 - 583 | 2 - 583 | 2 | 3 | THRTHRPHEPHEDD2 - 583 | 2 - 583 | 1 | 4 | THRTHRLYSLYSAA4 - 580 | 4 - 580 | 2 | 4 | THRTHRLYSLYSEE4 - 580 | 4 - 580 | 1 | 5 | GLYGLYLYSLYSAA8 - 580 | 8 - 580 | 2 | 5 | GLYGLYLYSLYSFF8 - 580 | 8 - 580 | 1 | 6 | PROPROLYSLYSAA7 - 580 | 7 - 580 | 2 | 6 | PROPROLYSLYSGG7 - 580 | 7 - 580 | 1 | 7 | THRTHRALAALAAA | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
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