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Yorodumi- PDB-4cq6: The crystal structure of the allene oxide cyclase 2 from Arabidop... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 4cq6 | |||||||||
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| Title | The crystal structure of the allene oxide cyclase 2 from Arabidopsis thaliana with bound inhibitor - vernolic acid | |||||||||
Components | ALLENE OXIDE CYCLASE 2, CHLOROPLASTIC | |||||||||
Keywords | ISOMERASE / JASMONATES / CYCLIZATION / OXYLIPINS | |||||||||
| Function / homology | Function and homology informationallene-oxide cyclase / allene-oxide cyclase activity / stromule / jasmonic acid biosynthetic process / chloroplast envelope / chloroplast stroma / chloroplast thylakoid membrane / response to cold / chloroplast / cytosol Similarity search - Function | |||||||||
| Biological species | ![]() | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.8 Å | |||||||||
Authors | Terlecka, B.A. / Pollmann, S. / Hofmann, E. | |||||||||
Citation | Journal: To be PublishedTitle: The Ligand-Bound Structures of the Aoc2 from A. Thaliana and the Implications for the Catalytic Mechanism Authors: Terlecka, B.A. / Pollmann, S. / Hofmann, E. | |||||||||
| History |
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| Remark 700 | SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW ... SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 9-STRANDED BARREL THIS IS REPRESENTED BY A 10-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 9-STRANDED BARREL THIS IS REPRESENTED BY A 10-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "CA" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 9-STRANDED BARREL THIS IS REPRESENTED BY A 10-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. |
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 4cq6.cif.gz | 219.8 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb4cq6.ent.gz | 179.1 KB | Display | PDB format |
| PDBx/mmJSON format | 4cq6.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 4cq6_validation.pdf.gz | 1 MB | Display | wwPDB validaton report |
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| Full document | 4cq6_full_validation.pdf.gz | 1.1 MB | Display | |
| Data in XML | 4cq6_validation.xml.gz | 28 KB | Display | |
| Data in CIF | 4cq6_validation.cif.gz | 41.3 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cq/4cq6 ftp://data.pdbj.org/pub/pdb/validation_reports/cq/4cq6 | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 4cq7C ![]() 2dioS C: citing same article ( S: Starting model for refinement |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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