登録情報 | データベース: PDB / ID: 3umq |
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タイトル | Crystal structure of peptidoglycan recognition protein-S complexed with butyric acid at 2.2 A resolution |
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要素 | Peptidoglycan recognition protein 1 |
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キーワード | IMMUNE SYSTEM / Immune response / secreted / antimicrobial / PGRP / recognition protein / Antibacterial / Peptidoglycan Binding / butyric acid |
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機能・相同性 | 機能・相同性情報
peptidoglycan immune receptor activity / N-acetylmuramoyl-L-alanine amidase activity / peptidoglycan binding / negative regulation of cytokine production / detection of bacterium / peptidoglycan catabolic process / defense response to Gram-positive bacterium / innate immune response / zinc ion binding / extracellular region類似検索 - 分子機能 Peptidoglycan recognition protein, PGRP-S / Peptidoglycan recognition protein family domain, metazoa/bacteria / Peptidoglycan recognition protein / Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. / Lysozyme-like / Peptidoglycan recognition protein-like / Ami_2 / N-acetylmuramoyl-L-alanine amidase / N-acetylmuramoyl-L-alanine amidase domain / N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily ...Peptidoglycan recognition protein, PGRP-S / Peptidoglycan recognition protein family domain, metazoa/bacteria / Peptidoglycan recognition protein / Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. / Lysozyme-like / Peptidoglycan recognition protein-like / Ami_2 / N-acetylmuramoyl-L-alanine amidase / N-acetylmuramoyl-L-alanine amidase domain / N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily / 3-Layer(aba) Sandwich / Alpha Beta類似検索 - ドメイン・相同性 butanoic acid / Peptidoglycan recognition protein 1類似検索 - 構成要素 |
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生物種 | ![](img/tx_mammal.gif) Camelus dromedarius (ヒトコブラクダ) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.2 Å |
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データ登録者 | Pandey, N. / Sharma, P. / Sinha, M. / Bhushan, A. / Kaur, P. / Sharma, S. / Singh, T.P. |
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引用 | ジャーナル: Arch.Biochem.Biophys. / 年: 2013 タイトル: Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site 著者: Sharma, P. / Yamini, S. / Dube, D. / Singh, A. / Mal, G. / Pandey, N. / Sinha, M. / Singh, A.K. / Dey, S. / Kaur, P. / Mitra, D.K. / Sharma, S. / Singh, T.P. |
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履歴 | 登録 | 2011年11月14日 | 登録サイト: RCSB / 処理サイト: PDBJ |
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改定 1.0 | 2012年7月4日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2013年5月15日 | Group: Database references |
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改定 1.2 | 2023年11月1日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description / Structure summary カテゴリ: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / entity / pdbx_entity_nonpoly / pdbx_initial_refinement_model / pdbx_struct_special_symmetry / struct_site Item: _chem_comp.name / _database_2.pdbx_DOI ..._chem_comp.name / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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