Deposited unit | A: D-tyrosyl-tRNA(Tyr) deacylase B: D-tyrosyl-tRNA(Tyr) deacylase C: D-tyrosyl-tRNA(Tyr) deacylase D: D-tyrosyl-tRNA(Tyr) deacylase E: D-tyrosyl-tRNA(Tyr) deacylase F: D-tyrosyl-tRNA(Tyr) deacylase G: D-tyrosyl-tRNA(Tyr) deacylase H: D-tyrosyl-tRNA(Tyr) deacylase hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 157,164 | 34 |
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Polymers | 153,865 | 8 |
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Non-polymers | 3,300 | 26 |
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Water | 0 | 0 |
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1 | A: D-tyrosyl-tRNA(Tyr) deacylase B: D-tyrosyl-tRNA(Tyr) deacylase hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 39,228 | 8 |
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Polymers | 38,466 | 2 |
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Non-polymers | 761 | 6 |
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Water | 0 | |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 4210 Å2 |
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ΔGint | -10 kcal/mol |
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Surface area | 13130 Å2 |
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Method | PISA |
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2 | C: D-tyrosyl-tRNA(Tyr) deacylase D: D-tyrosyl-tRNA(Tyr) deacylase hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 39,735 | 12 |
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Polymers | 38,466 | 2 |
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Non-polymers | 1,269 | 10 |
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Water | 0 | |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 5060 Å2 |
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ΔGint | -8 kcal/mol |
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Surface area | 12200 Å2 |
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Method | PISA |
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3 | E: D-tyrosyl-tRNA(Tyr) deacylase F: D-tyrosyl-tRNA(Tyr) deacylase hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 39,101 | 7 |
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Polymers | 38,466 | 2 |
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Non-polymers | 635 | 5 |
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Water | 0 | |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 4230 Å2 |
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ΔGint | -10 kcal/mol |
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Surface area | 11790 Å2 |
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Method | PISA |
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4 | G: D-tyrosyl-tRNA(Tyr) deacylase H: D-tyrosyl-tRNA(Tyr) deacylase hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 39,101 | 7 |
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Polymers | 38,466 | 2 |
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Non-polymers | 635 | 5 |
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Water | 0 | |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 3900 Å2 |
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ΔGint | -13 kcal/mol |
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Surface area | 12380 Å2 |
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Method | PISA |
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Unit cell | Length a, b, c (Å) | 77.18, 77.18, 214.52 |
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Angle α, β, γ (deg.) | 90.000, 90.000, 90.000 |
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Int Tables number | 78 |
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Space group name H-M | P43 |
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Noncrystallographic symmetry (NCS) | NCS domain: ID | Ens-ID | Details |
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1 | 1 | A2 | 1 | B3 | 1 | C4 | 1 | D5 | 1 | E6 | 1 | F | | | | | |
NCS domain segments: Ens-ID: 1 Dom-ID | Component-ID | Beg auth comp-ID | Beg label comp-ID | End auth comp-ID | End label comp-ID | Selection details | Auth asym-ID | Label asym-ID | Auth seq-ID | Label seq-ID |
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1 | 1 | METMETGLYGLYchain A and (resseq 1:10 or resseq 30:55 or resseq 81:90 or resseq 111:155 )AA1 - 10 | 1 - 10 | 1 | 2 | ILEILEILEILEchain A and (resseq 1:10 or resseq 30:55 or resseq 81:90 or resseq 111:155 )AA30 - 55 | 30 - 55 | 1 | 3 | TYRTYRTHRTHRchain A and (resseq 1:10 or resseq 30:55 or resseq 81:90 or resseq 111:155 )AA81 - 90 | 81 - 90 | 1 | 4 | GLUGLUILEILEchain A and (resseq 1:10 or resseq 30:55 or resseq 81:90 or resseq 111:155 )AA111 - 155 | 111 - 155 | 2 | 1 | METMETGLYGLYchain B and (resseq 1 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
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