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Open data
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Basic information
| Entry | Database: PDB / ID: 3h4e | ||||||
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| Title | X-ray Structure of Hexameric HIV-1 CA | ||||||
Components | Capsid protein p24 | ||||||
Keywords | VIRAL PROTEIN / capsid protein / hexamer / engineered disulfide bonds | ||||||
| Function / homology | Function and homology informationHIV-1 retropepsin / symbiont-mediated activation of host apoptosis / retroviral ribonuclease H / exoribonuclease H / exoribonuclease H activity / host multivesicular body / DNA integration / viral genome integration into host DNA / RNA-directed DNA polymerase / establishment of integrated proviral latency ...HIV-1 retropepsin / symbiont-mediated activation of host apoptosis / retroviral ribonuclease H / exoribonuclease H / exoribonuclease H activity / host multivesicular body / DNA integration / viral genome integration into host DNA / RNA-directed DNA polymerase / establishment of integrated proviral latency / viral penetration into host nucleus / RNA stem-loop binding / RNA-directed DNA polymerase activity / RNA-DNA hybrid ribonuclease activity / Transferases; Transferring phosphorus-containing groups; Nucleotidyltransferases / host cell / viral nucleocapsid / DNA recombination / DNA-directed DNA polymerase / aspartic-type endopeptidase activity / Hydrolases; Acting on ester bonds / DNA-directed DNA polymerase activity / symbiont-mediated suppression of host gene expression / viral translational frameshifting / lipid binding / symbiont entry into host cell / host cell nucleus / host cell plasma membrane / virion membrane / structural molecule activity / proteolysis / DNA binding / zinc ion binding / membrane Similarity search - Function | ||||||
| Biological species | ![]() Human immunodeficiency virus type 1 | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.704 Å | ||||||
Authors | Pornillos, O. | ||||||
Citation | Journal: Cell(Cambridge,Mass.) / Year: 2009Title: X-ray structures of the hexameric building block of the HIV capsid. Authors: Pornillos, O. / Ganser-Pornillos, B.K. / Kelly, B.N. / Hua, Y. / Whitby, F.G. / Stout, C.D. / Sundquist, W.I. / Hill, C.P. / Yeager, M. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 3h4e.cif.gz | 467.7 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb3h4e.ent.gz | 387.6 KB | Display | PDB format |
| PDBx/mmJSON format | 3h4e.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 3h4e_validation.pdf.gz | 515.3 KB | Display | wwPDB validaton report |
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| Full document | 3h4e_full_validation.pdf.gz | 532.7 KB | Display | |
| Data in XML | 3h4e_validation.xml.gz | 78.5 KB | Display | |
| Data in CIF | 3h4e_validation.cif.gz | 106.1 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/h4/3h4e ftp://data.pdbj.org/pub/pdb/validation_reports/h4/3h4e | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 3gv2C ![]() 3h47SC C: citing same article ( S: Starting model for refinement |
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| Similar structure data |
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Assembly
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| Noncrystallographic symmetry (NCS) | NCS domain:
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Human immunodeficiency virus type 1
X-RAY DIFFRACTION
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