- PDB-2yan: Crystal structure of the second glutaredoxin domain of human TXNL2 -
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Basic information
Entry
Database: PDB / ID: 2yan
Title
Crystal structure of the second glutaredoxin domain of human TXNL2
Components
GLUTAREDOXIN-3
Keywords
OXIDOREDUCTASE
Function / homology
Function and homology information
protein maturation by iron-sulfur cluster transfer / negative regulation of cardiac muscle hypertrophy / regulation of the force of heart contraction / iron-sulfur cluster assembly complex / [2Fe-2S] cluster assembly / iron-sulfur cluster assembly / cell redox homeostasis / protein kinase C binding / Iron uptake and transport / 2 iron, 2 sulfur cluster binding ...protein maturation by iron-sulfur cluster transfer / negative regulation of cardiac muscle hypertrophy / regulation of the force of heart contraction / iron-sulfur cluster assembly complex / [2Fe-2S] cluster assembly / iron-sulfur cluster assembly / cell redox homeostasis / protein kinase C binding / Iron uptake and transport / 2 iron, 2 sulfur cluster binding / Z disc / cell cortex / intracellular iron ion homeostasis / dendrite / RNA binding / identical protein binding / nucleus / metal ion binding / cytoplasm / cytosol Similarity search - Function
Resolution: 1.9→19.72 Å / Cor.coef. Fo:Fc: 0.963 / Cor.coef. Fo:Fc free: 0.949 / SU B: 4.093 / SU ML: 0.066 / Cross valid method: THROUGHOUT / ESU R: 0.097 / ESU R Free: 0.098 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.21237
1872
5 %
RANDOM
Rwork
0.18491
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obs
0.18629
35624
99.79 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK