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- PDB-2wte: The structure of the CRISPR-associated protein, Csa3, from Sulfol... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2wte | ||||||
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Title | The structure of the CRISPR-associated protein, Csa3, from Sulfolobus solfataricus at 1.8 angstrom resolution. | ||||||
![]() | CSA3 | ||||||
![]() | ANTIVIRAL PROTEIN / VIRAL RESISTANCE / WINGED HELIX-TURN-HELIX / RNAI / PRNAI NUCLEOTIDE-BINDING DOMAIN | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Lintner, N.G. / Alsbury, D.L. / Copie, V. / Young, M.J. / Lawrence, C.M. | ||||||
![]() | ![]() Title: The Structure of the Crispr-Associated Protein Csa3 Provides Insight Into the Regulation of the Crispr/Cas System. Authors: Lintner, N.G. / Frankel, K.A. / Tsutakawa, S.E. / Alsbury, D.L. / Copie, V. / Young, M.J. / Tainer, J.A. / Lawrence, C.M. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 182.9 KB | Display | ![]() |
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PDB format | ![]() | 155.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 447.7 KB | Display | ![]() |
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Full document | ![]() | 452.5 KB | Display | |
Data in XML | ![]() | 18.4 KB | Display | |
Data in CIF | ![]() | 26.2 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 28233.557 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Details: SELENOMETHIONINE-INCORPORATED / Source: (gene. exp.) ![]() ![]() ![]() ![]() #2: Chemical | ChemComp-PEG / | #3: Water | ChemComp-HOH / | Sequence details | N-TERMINAL HEXAHISTID | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.2 Å3/Da / Density % sol: 44.5 % / Description: NONE |
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Crystal grow | pH: 7.5 Details: 40% MPD, 5% PEG-8000, 0.1M SODIUM CACODYLATE PH 7.5 |
-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: ADSC CCD / Detector: CCD / Date: Dec 11, 2008 Details: VERTICAL FOCUSING MIRROR, SINGLE CRYSTAL SI(311) BENT MONOCHROMATOR (HORIZONTAL FOCUSING) |
Radiation | Monochromator: SIDE-SCATTERING CUBEROOT I- BEAM BENT SINGLE CRYSTAL, ASYMETRIC CUT 12.2 DEGS Protocol: MAD / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.91737 Å / Relative weight: 1 |
Reflection | Resolution: 1.8→50 Å / Num. obs: 46357 / % possible obs: 99.5 % / Observed criterion σ(I): -3 / Redundancy: 4 % / Rmerge(I) obs: 0.04 / Net I/σ(I): 27.5 |
Reflection shell | Resolution: 1.8→1.84 Å / Redundancy: 4.1 % / Rmerge(I) obs: 0.46 / Mean I/σ(I) obs: 1.9 / % possible all: 100 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: NONE Resolution: 1.8→67.57 Å / Cor.coef. Fo:Fc: 0.961 / Cor.coef. Fo:Fc free: 0.937 / SU B: 4.817 / SU ML: 0.074 / Cross valid method: THROUGHOUT / ESU R: 0.114 / ESU R Free: 0.115 / Stereochemistry target values: MAXIMUM LIKELIHOOD Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS.
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Solvent computation | Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: BABINET MODEL WITH MASK | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | Biso mean: 16.313 Å2
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Refinement step | Cycle: LAST / Resolution: 1.8→67.57 Å
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Refine LS restraints |
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