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Yorodumi- PDB-2rig: CRYSTAL STRUCTURE OF RECOMBINANT RABBIT INTERFERON-GAMMA AT 2.7-A... -
+Open data
-Basic information
Entry | Database: PDB / ID: 2rig | |||||||||
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Title | CRYSTAL STRUCTURE OF RECOMBINANT RABBIT INTERFERON-GAMMA AT 2.7-ANGSTROMS RESOLUTION | |||||||||
Components | INTERFERON-GAMMA | |||||||||
Keywords | CYTOKINE | |||||||||
Function / homology | Function and homology information type II interferon receptor binding / regulation of growth / positive regulation of autophagy / cytokine activity / defense response to virus / immune response / extracellular space Similarity search - Function | |||||||||
Biological species | Oryctolagus cuniculus (rabbit) | |||||||||
Method | X-RAY DIFFRACTION / Resolution: 2.3 Å | |||||||||
Authors | Samudzi, C.T. / Burton, L.E. / Rubin, J.R. | |||||||||
Citation | Journal: J.Biol.Chem. / Year: 1991 Title: Crystal structure of recombinant rabbit interferon-gamma at 2.7-A resolution. Authors: Samudzi, C.T. / Burton, L.E. / Rubin, J.R. #1: Journal: Biochem.Biophys.Res.Commun. / Year: 1991 Title: Crystallization and Preliminary X-Ray Diffraction Studies of Recombinant Rabbit Interferon-Gamma Authors: Samudzi, C.T. / Gribskov, C.L. / Burton, L.E. / Rubin, J.R. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2rig.cif.gz | 14.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2rig.ent.gz | 6.3 KB | Display | PDB format |
PDBx/mmJSON format | 2rig.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2rig_validation.pdf.gz | 309.5 KB | Display | wwPDB validaton report |
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Full document | 2rig_full_validation.pdf.gz | 309.5 KB | Display | |
Data in XML | 2rig_validation.xml.gz | 722 B | Display | |
Data in CIF | 2rig_validation.cif.gz | 1.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ri/2rig ftp://data.pdbj.org/pub/pdb/validation_reports/ri/2rig | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Protein | Mass: 16950.389 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Oryctolagus cuniculus (rabbit) / References: UniProt: P30123 |
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-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.51 Å3/Da / Density % sol: 50.99 % | ||||||||||||||||||||||||
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Crystal grow | *PLUS Temperature: 4 ℃ / pH: 8 / Method: batch method | ||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Reflection | *PLUS Highest resolution: 3 Å / Num. obs: 3284 / % possible obs: 84 % / Observed criterion σ(I): 2 / Num. measured all: 21224 / Rmerge(I) obs: 0.058 |
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-Processing
Software | Name: PROLSQ / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Refinement | Rfactor obs: 0.212 / Highest resolution: 2.3 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2.3 Å
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Refine LS restraints |
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