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Open data
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Basic information
Entry | Database: PDB / ID: 2n7x | ||||||||||||||||||||
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Title | Solution structure of microRNA 20b pre-element | ||||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / microRNA / UU base pair / UC mismatch / stem loop | Function / homology | RNA / RNA (> 10) | ![]() Biological species | synthetic construct (others) | Method | SOLUTION NMR / restrained simulated annealing | ![]() Yang, F. / Chen, Y. / Varani, G. | ![]() ![]() Title: Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer. Authors: Chen, Y. / Zubovic, L. / Yang, F. / Godin, K. / Pavelitz, T. / Castellanos, J. / Macchi, P. / Varani, G. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 286.3 KB | Display | ![]() |
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PDB format | ![]() | 238.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 408.8 KB | Display | ![]() |
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Full document | ![]() | 581.5 KB | Display | |
Data in XML | ![]() | 19.6 KB | Display | |
Data in CIF | ![]() | 29.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: RNA chain | Mass: 7318.335 Da / Num. of mol.: 1 / Source method: obtained synthetically / Source: (synth.) synthetic construct (others) |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions |
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-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: restrained simulated annealing / Software ordinal: 1 | |||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | |||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 |