+Open data
-Basic information
Entry | Database: PDB / ID: 2lro | ||||||
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Title | Solution structure, dynamics and binding studies of CtCBM11 | ||||||
Components | Endoglucanase H | ||||||
Keywords | HYDROLASE / Cellulosome | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Clostridium thermocellum (bacteria) | ||||||
Method | SOLUTION NMR / molecular dynamics | ||||||
Model details | closest to the average, model 17 | ||||||
Authors | Viegas, A. / Cabrita, E.J. | ||||||
Citation | Journal: Biochem.J. / Year: 2013 Title: Solution structure, dynamics and binding studies of a family 11 carbohydrate-binding module from Clostridium thermocellum (CtCBM11). Authors: Viegas, A. / Sardinha, J. / Freire, F. / Duarte, D.F. / Carvalho, A.L. / Fontes, C.M. / Romao, M.J. / Macedo, A.L. / Cabrita, E.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2lro.cif.gz | 1008.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2lro.ent.gz | 877.3 KB | Display | PDB format |
PDBx/mmJSON format | 2lro.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lr/2lro ftp://data.pdbj.org/pub/pdb/validation_reports/lr/2lro | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 18963.096 Da / Num. of mol.: 1 / Fragment: CBM11 domain residues 655-821 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Clostridium thermocellum (bacteria) / Strain: ATCC 27405 / DSM 1237 / Gene: celH, Cthe_1472 / Production host: Escherichia coli (E. coli) / References: UniProt: P16218, cellulase |
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#2: Chemical |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details | Contents: 1 mM [U-13C; U-15N] protein_1, 0.75 mM potassium phosphate, 90% H2O/10% D2O Solvent system: 90% H2O/10% D2O | ||||||||||||
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Sample |
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Sample conditions | Ionic strength: 0.75 / pH: 7.5 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker Avance / Manufacturer: Bruker / Model: Avance / Field strength: 600 MHz |
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-Processing
NMR software |
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Refinement | Method: molecular dynamics / Software ordinal: 1 | ||||||||||||||||
NMR representative | Selection criteria: closest to the average | ||||||||||||||||
NMR ensemble | Conformer selection criteria: target function / Conformers calculated total number: 20 / Conformers submitted total number: 20 |