- PDB-2leg: Membrane protein complex DsbB-DsbA structure by joint calculation... -
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基本情報
登録情報
データベース: PDB / ID: 2leg
タイトル
Membrane protein complex DsbB-DsbA structure by joint calculations with solid-state NMR and X-ray experimental data
要素
Disulfide bond formation protein B
Thiol:disulfide interchange protein DsbA
キーワード
MEMBRANE PROTEIN / OXIDOREDUCTASE / Disulfide bond / redox-active center / cell inner membrane / cell membrane / chaperone / electron transport / membrane / transmembrane / transport
機能・相同性
機能・相同性情報
oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor / cellular response to antibiotic / protein disulfide isomerase activity / protein-disulfide reductase activity / ubiquinone binding / protein folding / outer membrane-bounded periplasmic space / response to heat / electron transfer activity / plasma membrane 類似検索 - 分子機能
Bromodomain-like / DsbB-like / Disulphide bond formation protein DsbB/BdbC / Disulphide bond formation protein DsbB / DsbB-like superfamily / Disulfide bond formation protein DsbB / Thiol:disulphide interchange protein DsbA/DsbL / DSBA-like thioredoxin domain / DSBA-like thioredoxin domain / Thioredoxin, conserved site ...Bromodomain-like / DsbB-like / Disulphide bond formation protein DsbB/BdbC / Disulphide bond formation protein DsbB / DsbB-like superfamily / Disulfide bond formation protein DsbB / Thiol:disulphide interchange protein DsbA/DsbL / DSBA-like thioredoxin domain / DSBA-like thioredoxin domain / Thioredoxin, conserved site / Thioredoxin family active site. / Thioredoxin domain profile. / Thioredoxin domain / Glutaredoxin / Glutaredoxin / Thioredoxin-like superfamily / Up-down Bundle / 3-Layer(aba) Sandwich / Mainly Alpha / Alpha Beta 類似検索 - ドメイン・相同性
UBIQUINONE-1 / Disulfide bond formation protein B / Thiol:disulfide interchange protein DsbA 類似検索 - 構成要素
手法: simulated annealing / ソフトェア番号: 1 詳細: Joint calculation of DsbB-DsbA complex with solid-state NMR restraints and X-ray reflections from PDB entry 2HI7.
NMR constraints
NOE constraints total: 811
代表構造
選択基準: closest to the average
NMRアンサンブル
Average torsion angle constraint violation: 0 ° コンフォーマー選択の基準: structures with the lowest energy 計算したコンフォーマーの数: 200 / 登録したコンフォーマーの数: 10 / Maximum lower distance constraint violation: 0.51 Å / Maximum torsion angle constraint violation: 0 ° / Maximum upper distance constraint violation: 0.52 Å
NMR ensemble rms
Distance rms dev: 0.121 Å / Distance rms dev error: 0.003 Å