登録情報 データベース : PDB / ID : 2l43 構造の表示 ダウンロードとリンクタイトル Structural basis for histone code recognition by BRPF2-PHD1 finger 要素Histone H3.3,LINKER,Bromodomain-containing protein 1 詳細 キーワード TRANSCRIPTION / PHD finger / histone code機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
negative regulation of chromosome condensation / Barr body / regulation of centromere complex assembly / muscle cell differentiation / pericentric heterochromatin formation / inner kinetochore / histone H3-K14 acetyltransferase complex / oocyte maturation / regulation of developmental process / regulation of hemopoiesis ... negative regulation of chromosome condensation / Barr body / regulation of centromere complex assembly / muscle cell differentiation / pericentric heterochromatin formation / inner kinetochore / histone H3-K14 acetyltransferase complex / oocyte maturation / regulation of developmental process / regulation of hemopoiesis / MOZ/MORF histone acetyltransferase complex / nucleus organization / erythrocyte maturation / response to immobilization stress / spermatid development / subtelomeric heterochromatin formation / single fertilization / RNA polymerase II core promoter sequence-specific DNA binding / Replacement of protamines by nucleosomes in the male pronucleus / response to electrical stimulus / nucleosomal DNA binding / Regulation of TP53 Activity through Acetylation / Inhibition of DNA recombination at telomere / telomere organization / histone reader activity / RNA Polymerase I Promoter Opening / embryo implantation / Assembly of the ORC complex at the origin of replication / DNA methylation / Condensation of Prophase Chromosomes / ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression / SIRT1 negatively regulates rRNA expression / Chromatin modifications during the maternal to zygotic transition (MZT) / positive regulation of erythrocyte differentiation / PRC2 methylates histones and DNA / Defective pyroptosis / RNA Polymerase I Promoter Escape / Transcriptional regulation by small RNAs / Formation of the beta-catenin:TCF transactivating complex / RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function / NoRC negatively regulates rRNA expression / Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 / B-WICH complex positively regulates rRNA expression / multicellular organism growth / Meiotic recombination / Pre-NOTCH Transcription and Translation / Activation of anterior HOX genes in hindbrain development during early embryogenesis / Transcriptional regulation of granulopoiesis / osteoblast differentiation / structural constituent of chromatin / male gonad development / nucleosome / nucleosome assembly / RUNX1 regulates transcription of genes involved in differentiation of HSCs / Factors involved in megakaryocyte development and platelet production / HATs acetylate histones / histone binding / Senescence-Associated Secretory Phenotype (SASP) / positive regulation of cell growth / perikaryon / Oxidative Stress Induced Senescence / Estrogen-dependent gene expression / cell population proliferation / chromosome, telomeric region / nuclear speck / chromatin remodeling / protein heterodimerization activity / RNA polymerase II cis-regulatory region sequence-specific DNA binding / Amyloid fiber formation / dendrite / regulation of DNA-templated transcription / regulation of transcription by RNA polymerase II / protein-containing complex / extracellular exosome / extracellular region / nucleoplasm / nucleus / metal ion binding 類似検索 - 分子機能 BRPF2, ePHD domain / BRPF2, PHD domain / Enhancer of polycomb-like, N-terminal / Enhancer of polycomb-like / PHD-finger / PHD-zinc-finger like domain / Zinc/RING finger domain, C3HC4 (zinc finger) / Extended PHD (ePHD) domain / Extended PHD (ePHD) domain profile. / domain with conserved PWWP motif ... BRPF2, ePHD domain / BRPF2, PHD domain / Enhancer of polycomb-like, N-terminal / Enhancer of polycomb-like / PHD-finger / PHD-zinc-finger like domain / Zinc/RING finger domain, C3HC4 (zinc finger) / Extended PHD (ePHD) domain / Extended PHD (ePHD) domain profile. / domain with conserved PWWP motif / PWWP domain / PWWP domain profile. / PWWP domain / Herpes Virus-1 / Zinc finger, PHD-type, conserved site / Zinc finger PHD-type signature. / Zinc finger PHD-type profile. / Zinc finger, PHD-finger / Histone H3 signature 1. / Zinc finger, PHD-type / PHD zinc finger / Histone H3 signature 2. / Histone H3 / Histone H3/CENP-A / Histone H2A/H2B/H3 / Core histone H2A/H2B/H3/H4 / Zinc finger, FYVE/PHD-type / Histone-fold / Bromodomain, conserved site / Bromodomain signature. / Bromodomain / Bromodomain profile. / bromo domain / Bromodomain / Bromodomain-like superfamily / Zinc finger, RING/FYVE/PHD-type / 2-Layer Sandwich / Alpha Beta 類似検索 - ドメイン・相同性 Bromodomain-containing protein 1 / Histone H3.3 類似検索 - 構成要素生物種 Homo sapiens (ヒト)synthetic construct (人工物) 手法 溶液NMR / simulated annealing , torsion angle dynamics 詳細Model details lowest energy, model 1 データ登録者 Qin, S. / Zhang, J. / Wu, J. / Shi, Y. 引用ジャーナル : To be Published タイトル : Recognition of unmodified histone H3 by the first PHD finger of Bromodomain-PHD finger protein 2 provides insights into the regulation of histone acetyltransferases MOZ and MORF著者 : Qin, S. / Zhang, J. / Wu, J. / Shi, Y. 履歴 登録 2010年10月1日 登録サイト : BMRB / 処理サイト : PDBJ改定 1.0 2011年8月31日 Provider : repository / タイプ : Initial release改定 1.1 2020年1月15日 Group : Data collection / Database references ... Data collection / Database references / Source and taxonomy / Structure summary カテゴリ : entity / entity_name_com ... entity / entity_name_com / entity_src_gen / pdbx_nmr_software / struct_ref / struct_ref_seq_dif Item : _entity.pdbx_description / _pdbx_nmr_software.name ... _entity.pdbx_description / _pdbx_nmr_software.name / _struct_ref.pdbx_seq_one_letter_code / _struct_ref_seq_dif.details 改定 1.2 2024年5月1日 Group : Data collection / Database references / Derived calculationsカテゴリ : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_struct_conn_angle / struct_conn / struct_site Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id
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