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- PDB-2imn: Refined crystal structure of a recombinant immunoglobulin domain ... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2imn | ||||||
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Title | Refined crystal structure of a recombinant immunoglobulin domain and a complementarity-determining region 1-grafted mutant | ||||||
![]() | IGA-KAPPA MCPC603 FV (LIGHT CHAIN) | ||||||
![]() | IMMUNOGLOBULIN | ||||||
Function / homology | Immunoglobulins / Immunoglobulin-like / Sandwich / Mainly Beta / ACETATE ION / : ![]() | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Steipe, B. / Huber, R. | ||||||
![]() | ![]() Title: Refined crystal structure of a recombinant immunoglobulin domain and a complementarity-determining region 1-grafted mutant. Authors: Steipe, B. / Pluckthun, A. / Huber, R. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 37.5 KB | Display | ![]() |
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PDB format | ![]() | 25.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 387.6 KB | Display | ![]() |
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Full document | ![]() | 387.7 KB | Display | |
Data in XML | ![]() | 3.8 KB | Display | |
Data in CIF | ![]() | 6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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2 | ![]()
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Unit cell |
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Atom site foot note | 1: RESIDUES PRO 8 AND PRO 95 ARE CIS-PROLINES. 2: RESIDUES TYR 31, LYS 31A, LYS 103, AND ARG 108 ARE PARTIALLY DISORDERED IN THE ELECTRON DENSITY. | ||||||||
Components on special symmetry positions |
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Components
#1: Antibody | Mass: 12305.757 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
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#2: Chemical | ChemComp-SO4 / |
#3: Chemical | ChemComp-ACT / |
#4: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3.27 Å3/Da / Density % sol: 62.41 % |
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-Data collection
Reflection | *PLUS Highest resolution: 1.9 Å / Num. obs: 11262 / Num. measured all: 96963 / Rmerge(I) obs: 0.086 |
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Processing
Software | Name: EREF / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Refinement | Rfactor Rwork: 0.149 / Highest resolution: 1.97 Å Details: RESIDUES TYR 31, LYS 31A, LYS 103, AND ARG 108 ARE PARTIALLY DISORDERED IN THE ELECTRON DENSITY. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 1.97 Å
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Refine LS restraints |
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Refinement | *PLUS Highest resolution: 1.97 Å / Rfactor obs: 0.149 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS Type: o_angle_d / Dev ideal: 2.23 |