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Yorodumi- PDB-2gd0: The 1,1-proton transfer reaction mechanism by alpha-methylacyl-Co... -
+Open data
-Basic information
Entry | Database: PDB / ID: 2gd0 | ||||||
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Title | The 1,1-proton transfer reaction mechanism by alpha-methylacyl-CoA racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety | ||||||
Components | probable alpha-methylacyl-CoA racemase MCR | ||||||
Keywords | ISOMERASE / Alpha-methylacyl-CoA racemase / racemase / CoA transferase / proton transfer / Coenzyme A | ||||||
Function / homology | Function and homology information alpha-methylacyl-CoA racemase / alpha-methylacyl-CoA racemase activity / acyl-CoA metabolic process / bile acid metabolic process / protein homodimerization activity Similarity search - Function | ||||||
Biological species | Mycobacterium tuberculosis (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.7 Å | ||||||
Authors | Bhaumik, P. / Wierenga, R.K. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 2007 Title: The Catalysis of the 1,1-Proton Transfer by alpha-Methyl-acyl-CoA Racemase Is Coupled to a Movement of the Fatty Acyl Moiety Over a Hydrophobic, Methionine-rich Surface Authors: Bhaumik, P. / Schmitz, W. / Hassinen, A. / Hiltunen, J.K. / Conzelmann, E. / Wierenga, R.K. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2gd0.cif.gz | 312.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2gd0.ent.gz | 251.7 KB | Display | PDB format |
PDBx/mmJSON format | 2gd0.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2gd0_validation.pdf.gz | 1.2 MB | Display | wwPDB validaton report |
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Full document | 2gd0_full_validation.pdf.gz | 1.2 MB | Display | |
Data in XML | 2gd0_validation.xml.gz | 69.9 KB | Display | |
Data in CIF | 2gd0_validation.cif.gz | 101.7 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/gd/2gd0 ftp://data.pdbj.org/pub/pdb/validation_reports/gd/2gd0 | HTTPS FTP |
-Related structure data
Related structure data | 2gceC 2gciC 2gd2C 2gd6C 1x74S S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Refine code: 6
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