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Yorodumi- PDB-2c2c: REFINEMENT OF THE CRYSTAL STRUCTURE OF OXIDIZED RHODOSPIRILLUM RU... -
+Open data
-Basic information
Entry | Database: PDB / ID: 2c2c | ||||||||||||
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Title | REFINEMENT OF THE CRYSTAL STRUCTURE OF OXIDIZED RHODOSPIRILLUM RUBRUM CYTOCHROME C2 | ||||||||||||
Components | CYTOCHROME C2 | ||||||||||||
Keywords | ELECTRON TRANSPORT PROTEIN (CYTOCHROME) | ||||||||||||
Function / homology | Function and homology information photosynthetic electron transport chain / photosynthesis / electron transport chain / electron transfer activity / heme binding / metal ion binding Similarity search - Function | ||||||||||||
Biological species | Rhodospirillum rubrum (bacteria) | ||||||||||||
Method | X-RAY DIFFRACTION / Resolution: 2 Å | ||||||||||||
Authors | Bhatia, G. / Finzel, B.C. / Kraut, J. | ||||||||||||
Citation | Journal: Thesis / Year: 1981 Title: Refinement of the Crystal Structure of Oxidized Rhodospirillum Rubrum Cytochrome C2 Authors: Bhatia, G.E. #1: Journal: J.Biol.Chem. / Year: 1973 Title: The Structure of Oxidized Cytochrome C2 of Rhodospirillum Rubrum Authors: Salemme, F.R. / Freer, S.T. / Xuong, N.H. / Alden, R.A. / Kraut, J. | ||||||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2c2c.cif.gz | 36.6 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2c2c.ent.gz | 23.2 KB | Display | PDB format |
PDBx/mmJSON format | 2c2c.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2c2c_validation.pdf.gz | 799.2 KB | Display | wwPDB validaton report |
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Full document | 2c2c_full_validation.pdf.gz | 817.8 KB | Display | |
Data in XML | 2c2c_validation.xml.gz | 10.9 KB | Display | |
Data in CIF | 2c2c_validation.cif.gz | 13.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/c2/2c2c ftp://data.pdbj.org/pub/pdb/validation_reports/c2/2c2c | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Protein | Mass: 12260.898 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Rhodospirillum rubrum (bacteria) / References: UniProt: P00092, UniProt: P0C189*PLUS |
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#2: Chemical | ChemComp-HEC / |
#3: Water | ChemComp-HOH / |
Has protein modification | Y |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.08 Å3/Da / Density % sol: 40.76 % |
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-Processing
Software | Name: PROLSQ / Classification: refinement | ||||||||||||
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Refinement | Rfactor Rwork: 0.172 / Highest resolution: 2 Å | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2 Å
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