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- PDB-27xp: Crystal structure of monoalkyl phthalate hydrolase from Rhodococc... -

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Basic information

Entry
Database: PDB / ID: 27xp
TitleCrystal structure of monoalkyl phthalate hydrolase from Rhodococcus sp. EG-5 n complex with Paranitrophenyl butyrate (PNPB)
ComponentsMono-ethylhexylphthalate hydrolase
KeywordsHYDROLASE / Mono-butyl phthalate
Function / homology: / alpha/beta hydrolase fold / Alpha/beta hydrolase fold-1 / Alpha/Beta hydrolase fold / hydrolase activity / membrane / P-NITROPHENOL / Mono-ethylhexylphthalate hydrolase
Function and homology information
Biological speciesRhodococcus sp. EG-5 (bacteria)
MethodX-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 2.8 Å
AuthorsAggarwal, S. / Jangid, K. / Singh, S. / Sharma, A.K. / Kumar, P.
Funding support India, 1items
OrganizationGrant numberCountry
Department of Biotechnology (DBT, India) India
CitationJournal: To Be Published
Title: Crystal structure of monoalkyl phthalate hydrolase from Rhodococcus sp. EG-5
Authors: Aggarwal, S. / Jangid, K. / Singh, S. / Sharma, A.K. / Kumar, P.
History
DepositionJun 16, 2026Deposition site: PDBJ / Processing site: PDBJ
Revision 1.0Jul 1, 2026Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Mono-ethylhexylphthalate hydrolase
B: Mono-ethylhexylphthalate hydrolase
C: Mono-ethylhexylphthalate hydrolase
D: Mono-ethylhexylphthalate hydrolase
E: Mono-ethylhexylphthalate hydrolase
F: Mono-ethylhexylphthalate hydrolase
G: Mono-ethylhexylphthalate hydrolase
H: Mono-ethylhexylphthalate hydrolase
I: Mono-ethylhexylphthalate hydrolase
J: Mono-ethylhexylphthalate hydrolase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)330,80411
Polymers330,66510
Non-polymers1391
Water724
1
A: Mono-ethylhexylphthalate hydrolase
B: Mono-ethylhexylphthalate hydrolase


Theoretical massNumber of molelcules
Total (without water)66,1332
Polymers66,1332
Non-polymers00
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
C: Mono-ethylhexylphthalate hydrolase
D: Mono-ethylhexylphthalate hydrolase


Theoretical massNumber of molelcules
Total (without water)66,1332
Polymers66,1332
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
3
E: Mono-ethylhexylphthalate hydrolase
H: Mono-ethylhexylphthalate hydrolase


Theoretical massNumber of molelcules
Total (without water)66,1332
Polymers66,1332
Non-polymers00
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
4
F: Mono-ethylhexylphthalate hydrolase
G: Mono-ethylhexylphthalate hydrolase
hetero molecules


Theoretical massNumber of molelcules
Total (without water)66,2723
Polymers66,1332
Non-polymers1391
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
5
I: Mono-ethylhexylphthalate hydrolase
J: Mono-ethylhexylphthalate hydrolase


Theoretical massNumber of molelcules
Total (without water)66,1332
Polymers66,1332
Non-polymers00
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)176.313, 244.89, 192.097
Angle α, β, γ (deg.)90, 90, 90
Int Tables number21
Space group name H-MC222
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails (eV)
11A
21A
32A
42A
53A
63A
74A
84A
95A
105A
116A
126A
137A
147A
158A
168A
179A
189A
1910A
2010A
2111A
2211A
2312A
2412A
2513A
2613A
2714A
2814A
2915A
3015A
3116A
3216A
3317A
3417A
3518A
3618A
3719A
3819A
3920A
4020A
4121A
4221A
4322A
4422A
4523A
4623A
4724A
4824A
4925A
5025A
5126A
5226A
5327A
5427A
5528A
5628A
5729A
5829A
5930A
6030A
6131A
6231A
6332A
6432A
6533A
6633A
6734A
6834A
6935A
7035A
7136A
7236A
7337A
7437A
7538A
7638A
7739A
7839A
7940A
8040A
8141A
8241A
8342A
8442A
8543A
8643A
8744A
8844A
8945A
9045A

NCS domain segments:

Auth asym-ID: A / Label asym-ID: A

Dom-IDComponent-IDEns-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDAuth seq-IDLabel seq-ID
111LEULEUALAALA5 - 2975 - 297
211LEULEUALAALA5 - 2975 - 297
322THRTHRSERSER3 - 2983 - 298
422THRTHRSERSER3 - 2983 - 298
533LEULEUSERSER5 - 2985 - 298
633LEULEUSERSER5 - 2985 - 298
744THRTHRALAALA3 - 2973 - 297
844THRTHRALAALA3 - 2973 - 297
955LEULEUALAALA5 - 2975 - 297
1055LEULEUALAALA5 - 2975 - 297
1166THRTHRSERSER3 - 2983 - 298
1266THRTHRSERSER3 - 2983 - 298
1377ASPASPALAALA4 - 2974 - 297
1477ASPASPALAALA4 - 2974 - 297
1588LEULEUSERSER5 - 2985 - 298
1688LEULEUSERSER5 - 2985 - 298
1799THRTHRALAALA3 - 2973 - 297
1899THRTHRALAALA3 - 2973 - 297
191010LEULEUSERSER5 - 2985 - 298
201010LEULEUSERSER5 - 2985 - 298
211111LEULEUSERSER5 - 2985 - 298
221111LEULEUSERSER5 - 2985 - 298
231212LEULEUALAALA5 - 2975 - 297
241212LEULEUALAALA5 - 2975 - 297
251313LEULEUSERSER5 - 2985 - 298
261313LEULEUSERSER5 - 2985 - 298
271414LEULEUSERSER5 - 2985 - 298
281414LEULEUSERSER5 - 2985 - 298
291515LEULEUSERSER5 - 2985 - 298
301515LEULEUSERSER5 - 2985 - 298
311616LEULEUSERSER5 - 2985 - 298
321616LEULEUSERSER5 - 2985 - 298
331717LEULEUALAALA5 - 2975 - 297
341717LEULEUALAALA5 - 2975 - 297
351818LEULEUSERSER5 - 2985 - 298
361818LEULEUSERSER5 - 2985 - 298
371919THRTHRSERSER3 - 2983 - 298
381919THRTHRSERSER3 - 2983 - 298
392020LEULEUSERSER5 - 2985 - 298
402020LEULEUSERSER5 - 2985 - 298
412121THRTHRSERSER3 - 2983 - 298
422121THRTHRSERSER3 - 2983 - 298
432222ASPASPSERSER4 - 2984 - 298
442222ASPASPSERSER4 - 2984 - 298
452323LEULEUSERSER5 - 2985 - 298
462323LEULEUSERSER5 - 2985 - 298
472424THRTHRSERSER3 - 2983 - 298
482424THRTHRSERSER3 - 2983 - 298
492525LEULEUSERSER5 - 2985 - 298
502525LEULEUSERSER5 - 2985 - 298
512626LEULEUSERSER5 - 2985 - 298
522626LEULEUSERSER5 - 2985 - 298
532727LEULEUSERSER5 - 2985 - 298
542727LEULEUSERSER5 - 2985 - 298
552828LEULEUSERSER5 - 2985 - 298
562828LEULEUSERSER5 - 2985 - 298
572929LEULEUSERSER5 - 2985 - 298
582929LEULEUSERSER5 - 2985 - 298
593030LEULEUSERSER5 - 2985 - 298
603030LEULEUSERSER5 - 2985 - 298
613131LEULEUALAALA5 - 2975 - 297
623131LEULEUALAALA5 - 2975 - 297
633232THRTHRSERSER3 - 2983 - 298
643232THRTHRSERSER3 - 2983 - 298
653333ASPASPSERSER4 - 2984 - 298
663333ASPASPSERSER4 - 2984 - 298
673434LEULEUSERSER5 - 2985 - 298
683434LEULEUSERSER5 - 2985 - 298
693535THRTHRSERSER3 - 2983 - 298
703535THRTHRSERSER3 - 2983 - 298
713636LEULEUSERSER5 - 2985 - 298
723636LEULEUSERSER5 - 2985 - 298
733737LEULEUSERSER5 - 2985 - 298
743737LEULEUSERSER5 - 2985 - 298
753838LEULEUSERSER5 - 2985 - 298
763838LEULEUSERSER5 - 2985 - 298
773939LEULEUALAALA5 - 2975 - 297
783939LEULEUALAALA5 - 2975 - 297
794040ASPASPSERSER4 - 2984 - 298
804040ASPASPSERSER4 - 2984 - 298
814141LEULEUSERSER5 - 2985 - 298
824141LEULEUSERSER5 - 2985 - 298
834242THRTHRSERSER3 - 2983 - 298
844242THRTHRSERSER3 - 2983 - 298
854343LEULEUSERSER5 - 2985 - 298
864343LEULEUSERSER5 - 2985 - 298
874444ASPASPSERSER4 - 2984 - 298
884444ASPASPSERSER4 - 2984 - 298
894545LEULEUSERSER5 - 2985 - 298
904545LEULEUSERSER5 - 2985 - 298

NCS ensembles :
IDDetails (eV)
1Local NCS retraints between domains: 1 2
2Local NCS retraints between domains: 3 4
3Local NCS retraints between domains: 5 6
4Local NCS retraints between domains: 7 8
5Local NCS retraints between domains: 9 10
6Local NCS retraints between domains: 11 12
7Local NCS retraints between domains: 13 14
8Local NCS retraints between domains: 15 16
9Local NCS retraints between domains: 17 18
10Local NCS retraints between domains: 19 20
11Local NCS retraints between domains: 21 22
12Local NCS retraints between domains: 23 24
13Local NCS retraints between domains: 25 26
14Local NCS retraints between domains: 27 28
15Local NCS retraints between domains: 29 30
16Local NCS retraints between domains: 31 32
17Local NCS retraints between domains: 33 34
18Local NCS retraints between domains: 35 36
19Local NCS retraints between domains: 37 38
20Local NCS retraints between domains: 39 40
21Local NCS retraints between domains: 41 42
22Local NCS retraints between domains: 43 44
23Local NCS retraints between domains: 45 46
24Local NCS retraints between domains: 47 48
25Local NCS retraints between domains: 49 50
26Local NCS retraints between domains: 51 52
27Local NCS retraints between domains: 53 54
28Local NCS retraints between domains: 55 56
29Local NCS retraints between domains: 57 58
30Local NCS retraints between domains: 59 60
31Local NCS retraints between domains: 61 62
32Local NCS retraints between domains: 63 64
33Local NCS retraints between domains: 65 66
34Local NCS retraints between domains: 67 68
35Local NCS retraints between domains: 69 70
36Local NCS retraints between domains: 71 72
37Local NCS retraints between domains: 73 74
38Local NCS retraints between domains: 75 76
39Local NCS retraints between domains: 77 78
40Local NCS retraints between domains: 79 80
41Local NCS retraints between domains: 81 82
42Local NCS retraints between domains: 83 84
43Local NCS retraints between domains: 85 86
44Local NCS retraints between domains: 87 88
45Local NCS retraints between domains: 89 90

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Components

#1: Protein
Mono-ethylhexylphthalate hydrolase


Mass: 33066.473 Da / Num. of mol.: 10
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Rhodococcus sp. EG-5 (bacteria) / Gene: mehpH / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: A0A0U5ADH4
#2: Chemical ChemComp-NPO / P-NITROPHENOL


Mass: 139.109 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C6H5NO3 / Feature type: SUBJECT OF INVESTIGATION
#3: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 4 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestY
Has protein modificationN

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.14 Å3/Da / Density % sol: 60.77 %
Crystal growTemperature: 293 K / Method: vapor diffusion, sitting drop / pH: 7.4 / Details: 0.1M Sodium Malonate pH 7.4 20% PEG 3350

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: ROTATING ANODE / Type: RIGAKU MICROMAX-007 HF / Wavelength: 1.54184 Å
DetectorType: RIGAKU HyPix-6000HE / Detector: PIXEL / Date: Sep 24, 2025
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.54184 Å / Relative weight: 1
ReflectionResolution: 2.8→24.292 Å / Num. obs: 101792 / % possible obs: 99.65 % / Redundancy: 9.8 % / CC1/2: 0.968 / Net I/σ(I): 9.2
Reflection shellResolution: 2.8→2.9 Å / Num. unique obs: 10063 / CC1/2: 0.831

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Processing

Software
NameVersionClassification
REFMAC5.8.0425refinement
CrysalisProdata reduction
Aimlessdata scaling
MOLREPphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.8→24.292 Å / Cor.coef. Fo:Fc: 0.797 / Cor.coef. Fo:Fc free: 0.761 / SU B: 31.363 / SU ML: 0.284 / Cross valid method: NONE / ESU R: 0.274 / ESU R Free: 0.085
Details: Hydrogens have been added in their riding positions
RfactorNum. reflection% reflection
Rfree0.2937 5006 4.92 %
Rwork0.2723 96741 -
all0.273 --
obs-101747 99.697 %
Solvent computationIon probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK BULK SOLVENT
Displacement parametersBiso mean: 31.073 Å2
Baniso -1Baniso -2Baniso -3
1--4.575 Å2-0 Å2-0 Å2
2---0.4 Å20 Å2
3---4.974 Å2
Refinement stepCycle: LAST / Resolution: 2.8→24.292 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms22175 0 10 4 22189
Refine LS restraints
Refine-IDTypeDev idealDev ideal targetNumber
X-RAY DIFFRACTIONr_bond_refined_d0.0080.01222675
X-RAY DIFFRACTIONr_bond_other_d00.01621471
X-RAY DIFFRACTIONr_angle_refined_deg1.3831.81130806
X-RAY DIFFRACTIONr_angle_other_deg0.4561.74849371
X-RAY DIFFRACTIONr_dihedral_angle_1_deg5.77652881
X-RAY DIFFRACTIONr_dihedral_angle_2_deg9.165153
X-RAY DIFFRACTIONr_dihedral_angle_3_deg14.414103593
X-RAY DIFFRACTIONr_dihedral_angle_6_deg14.31810979
X-RAY DIFFRACTIONr_chiral_restr0.0670.23459
X-RAY DIFFRACTIONr_gen_planes_refined0.0060.0226930
X-RAY DIFFRACTIONr_gen_planes_other0.0080.025118
X-RAY DIFFRACTIONr_nbd_refined0.2180.24296
X-RAY DIFFRACTIONr_symmetry_nbd_other0.2080.218038
X-RAY DIFFRACTIONr_nbtor_refined0.1790.211102
X-RAY DIFFRACTIONr_symmetry_nbtor_other0.0770.211527
X-RAY DIFFRACTIONr_xyhbond_nbd_refined0.1470.2247
X-RAY DIFFRACTIONr_symmetry_xyhbond_nbd_other0.0310.21
X-RAY DIFFRACTIONr_symmetry_nbd_refined0.2060.266
X-RAY DIFFRACTIONr_nbd_other0.2470.2387
X-RAY DIFFRACTIONr_symmetry_xyhbond_nbd_refined0.2320.221
X-RAY DIFFRACTIONr_mcbond_it0.6861.72111584
X-RAY DIFFRACTIONr_mcbond_other0.6851.72111584
X-RAY DIFFRACTIONr_mcangle_it1.0343.09214445
X-RAY DIFFRACTIONr_mcangle_other1.0343.09214446
X-RAY DIFFRACTIONr_scbond_it0.6551.7511091
X-RAY DIFFRACTIONr_scbond_other0.6551.7511092
X-RAY DIFFRACTIONr_scangle_it0.9933.21416361
X-RAY DIFFRACTIONr_scangle_other0.9933.21416362
X-RAY DIFFRACTIONr_lrange_it1.32816.5324092
X-RAY DIFFRACTIONr_lrange_other1.32816.53124093
X-RAY DIFFRACTIONr_ncsr_local_group_10.0860.058745
X-RAY DIFFRACTIONr_ncsr_local_group_20.0970.058769
X-RAY DIFFRACTIONr_ncsr_local_group_30.0850.058833
X-RAY DIFFRACTIONr_ncsr_local_group_40.080.058897
X-RAY DIFFRACTIONr_ncsr_local_group_50.0860.058764
X-RAY DIFFRACTIONr_ncsr_local_group_60.0880.058579
X-RAY DIFFRACTIONr_ncsr_local_group_70.0850.058800
X-RAY DIFFRACTIONr_ncsr_local_group_80.0850.058828
X-RAY DIFFRACTIONr_ncsr_local_group_90.080.058922
X-RAY DIFFRACTIONr_ncsr_local_group_100.090.058766
X-RAY DIFFRACTIONr_ncsr_local_group_110.0770.058975
X-RAY DIFFRACTIONr_ncsr_local_group_120.0760.058861
X-RAY DIFFRACTIONr_ncsr_local_group_130.0790.058898
X-RAY DIFFRACTIONr_ncsr_local_group_140.0850.058513
X-RAY DIFFRACTIONr_ncsr_local_group_150.0810.058903
X-RAY DIFFRACTIONr_ncsr_local_group_160.080.058881
X-RAY DIFFRACTIONr_ncsr_local_group_170.0790.058776
X-RAY DIFFRACTIONr_ncsr_local_group_180.0850.058824
X-RAY DIFFRACTIONr_ncsr_local_group_190.0820.058922
X-RAY DIFFRACTIONr_ncsr_local_group_200.0920.058772
X-RAY DIFFRACTIONr_ncsr_local_group_210.0790.058664
X-RAY DIFFRACTIONr_ncsr_local_group_220.0860.058846
X-RAY DIFFRACTIONr_ncsr_local_group_230.0870.058811
X-RAY DIFFRACTIONr_ncsr_local_group_240.0770.058898
X-RAY DIFFRACTIONr_ncsr_local_group_250.0790.058932
X-RAY DIFFRACTIONr_ncsr_local_group_260.0820.059012
X-RAY DIFFRACTIONr_ncsr_local_group_270.0770.058556
X-RAY DIFFRACTIONr_ncsr_local_group_280.0780.058947
X-RAY DIFFRACTIONr_ncsr_local_group_290.080.059042
X-RAY DIFFRACTIONr_ncsr_local_group_300.0760.058870
X-RAY DIFFRACTIONr_ncsr_local_group_310.0840.058836
X-RAY DIFFRACTIONr_ncsr_local_group_320.0810.058627
X-RAY DIFFRACTIONr_ncsr_local_group_330.0820.058915
X-RAY DIFFRACTIONr_ncsr_local_group_340.0770.058889
X-RAY DIFFRACTIONr_ncsr_local_group_350.0730.058974
X-RAY DIFFRACTIONr_ncsr_local_group_360.0890.058490
X-RAY DIFFRACTIONr_ncsr_local_group_370.0820.058899
X-RAY DIFFRACTIONr_ncsr_local_group_380.0820.058938
X-RAY DIFFRACTIONr_ncsr_local_group_390.0840.058770
X-RAY DIFFRACTIONr_ncsr_local_group_400.0880.058543
X-RAY DIFFRACTIONr_ncsr_local_group_410.0840.058543
X-RAY DIFFRACTIONr_ncsr_local_group_420.0790.058678
X-RAY DIFFRACTIONr_ncsr_local_group_430.070.058978
X-RAY DIFFRACTIONr_ncsr_local_group_440.0810.058870
X-RAY DIFFRACTIONr_ncsr_local_group_450.0770.058872
Refine LS restraints NCS
Ens-IDDom-IDAuth asym-IDRefine-IDTypeRms dev position (Å)Weight position
11AX-RAY DIFFRACTIONLocal ncs0.086020.05009
12AX-RAY DIFFRACTIONLocal ncs0.086020.05009
23AX-RAY DIFFRACTIONLocal ncs0.096540.05009
24AX-RAY DIFFRACTIONLocal ncs0.096540.05009
35AX-RAY DIFFRACTIONLocal ncs0.084630.05009
36AX-RAY DIFFRACTIONLocal ncs0.084630.05009
47AX-RAY DIFFRACTIONLocal ncs0.080360.05009
48AX-RAY DIFFRACTIONLocal ncs0.080360.05009
59AX-RAY DIFFRACTIONLocal ncs0.08570.05009
510AX-RAY DIFFRACTIONLocal ncs0.08570.05009
611AX-RAY DIFFRACTIONLocal ncs0.088260.05009
612AX-RAY DIFFRACTIONLocal ncs0.088260.05009
713AX-RAY DIFFRACTIONLocal ncs0.084960.05009
714AX-RAY DIFFRACTIONLocal ncs0.084960.05009
815AX-RAY DIFFRACTIONLocal ncs0.084980.05009
816AX-RAY DIFFRACTIONLocal ncs0.084980.05009
917AX-RAY DIFFRACTIONLocal ncs0.08020.05009
918AX-RAY DIFFRACTIONLocal ncs0.08020.05009
1019AX-RAY DIFFRACTIONLocal ncs0.090120.05009
1020AX-RAY DIFFRACTIONLocal ncs0.090120.05009
1121AX-RAY DIFFRACTIONLocal ncs0.076740.05009
1122AX-RAY DIFFRACTIONLocal ncs0.076740.05009
1223AX-RAY DIFFRACTIONLocal ncs0.076250.05009
1224AX-RAY DIFFRACTIONLocal ncs0.076250.05009
1325AX-RAY DIFFRACTIONLocal ncs0.078890.05009
1326AX-RAY DIFFRACTIONLocal ncs0.078890.05009
1427AX-RAY DIFFRACTIONLocal ncs0.084860.05009
1428AX-RAY DIFFRACTIONLocal ncs0.084860.05009
1529AX-RAY DIFFRACTIONLocal ncs0.080570.05009
1530AX-RAY DIFFRACTIONLocal ncs0.080570.05009
1631AX-RAY DIFFRACTIONLocal ncs0.080410.05009
1632AX-RAY DIFFRACTIONLocal ncs0.080410.05009
1733AX-RAY DIFFRACTIONLocal ncs0.079070.05009
1734AX-RAY DIFFRACTIONLocal ncs0.079070.05009
1835AX-RAY DIFFRACTIONLocal ncs0.08480.05009
1836AX-RAY DIFFRACTIONLocal ncs0.08480.05009
1937AX-RAY DIFFRACTIONLocal ncs0.081650.05009
1938AX-RAY DIFFRACTIONLocal ncs0.081650.05009
2039AX-RAY DIFFRACTIONLocal ncs0.091940.05009
2040AX-RAY DIFFRACTIONLocal ncs0.091940.05009
2141AX-RAY DIFFRACTIONLocal ncs0.079210.05009
2142AX-RAY DIFFRACTIONLocal ncs0.079210.05009
2243AX-RAY DIFFRACTIONLocal ncs0.08640.05009
2244AX-RAY DIFFRACTIONLocal ncs0.08640.05009
2345AX-RAY DIFFRACTIONLocal ncs0.087260.05009
2346AX-RAY DIFFRACTIONLocal ncs0.087260.05009
2447AX-RAY DIFFRACTIONLocal ncs0.077170.05009
2448AX-RAY DIFFRACTIONLocal ncs0.077170.05009
2549AX-RAY DIFFRACTIONLocal ncs0.079390.05009
2550AX-RAY DIFFRACTIONLocal ncs0.079390.05009
2651AX-RAY DIFFRACTIONLocal ncs0.081910.05009
2652AX-RAY DIFFRACTIONLocal ncs0.081910.05009
2753AX-RAY DIFFRACTIONLocal ncs0.077370.05009
2754AX-RAY DIFFRACTIONLocal ncs0.077370.05009
2855AX-RAY DIFFRACTIONLocal ncs0.078490.05009
2856AX-RAY DIFFRACTIONLocal ncs0.078490.05009
2957AX-RAY DIFFRACTIONLocal ncs0.080390.05009
2958AX-RAY DIFFRACTIONLocal ncs0.080390.05009
3059AX-RAY DIFFRACTIONLocal ncs0.075940.05009
3060AX-RAY DIFFRACTIONLocal ncs0.075940.05009
3161AX-RAY DIFFRACTIONLocal ncs0.084390.05009
3162AX-RAY DIFFRACTIONLocal ncs0.084390.05009
3263AX-RAY DIFFRACTIONLocal ncs0.081190.05009
3264AX-RAY DIFFRACTIONLocal ncs0.081190.05009
3365AX-RAY DIFFRACTIONLocal ncs0.081780.05009
3366AX-RAY DIFFRACTIONLocal ncs0.081780.05009
3467AX-RAY DIFFRACTIONLocal ncs0.077490.05009
3468AX-RAY DIFFRACTIONLocal ncs0.077490.05009
3569AX-RAY DIFFRACTIONLocal ncs0.07330.05009
3570AX-RAY DIFFRACTIONLocal ncs0.07330.05009
3671AX-RAY DIFFRACTIONLocal ncs0.089340.05009
3672AX-RAY DIFFRACTIONLocal ncs0.089340.05009
3773AX-RAY DIFFRACTIONLocal ncs0.081880.05009
3774AX-RAY DIFFRACTIONLocal ncs0.081880.05009
3875AX-RAY DIFFRACTIONLocal ncs0.081790.05009
3876AX-RAY DIFFRACTIONLocal ncs0.081790.05009
3977AX-RAY DIFFRACTIONLocal ncs0.0840.05009
3978AX-RAY DIFFRACTIONLocal ncs0.0840.05009
4079AX-RAY DIFFRACTIONLocal ncs0.088270.05009
4080AX-RAY DIFFRACTIONLocal ncs0.088270.05009
4181AX-RAY DIFFRACTIONLocal ncs0.084110.05009
4182AX-RAY DIFFRACTIONLocal ncs0.084110.05009
4283AX-RAY DIFFRACTIONLocal ncs0.079350.05009
4284AX-RAY DIFFRACTIONLocal ncs0.079350.05009
4385AX-RAY DIFFRACTIONLocal ncs0.069930.05009
4386AX-RAY DIFFRACTIONLocal ncs0.069930.05009
4487AX-RAY DIFFRACTIONLocal ncs0.081060.05009
4488AX-RAY DIFFRACTIONLocal ncs0.081060.05009
4589AX-RAY DIFFRACTIONLocal ncs0.077490.05009
4590AX-RAY DIFFRACTIONLocal ncs0.077490.05009
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.8-2.8730.3673750.3427058X-RAY DIFFRACTION99.812
2.873-2.9510.3763890.3236908X-RAY DIFFRACTION99.9178
2.951-3.0370.3513800.3156711X-RAY DIFFRACTION99.9718
3.037-3.130.3092980.2926601X-RAY DIFFRACTION100
3.13-3.2330.3243090.2886360X-RAY DIFFRACTION99.97
3.233-3.3460.3172950.2966220X-RAY DIFFRACTION100
3.346-3.4730.3193400.3015876X-RAY DIFFRACTION99.9196
3.473-3.6140.2942900.2875745X-RAY DIFFRACTION100
3.614-3.7750.3072810.2915483X-RAY DIFFRACTION99.9827
3.775-3.9590.2722960.2615234X-RAY DIFFRACTION99.8736
3.959-4.1730.2392450.2395014X-RAY DIFFRACTION99.924
4.173-4.4260.2792340.2474786X-RAY DIFFRACTION100
4.426-4.7320.2312160.2314456X-RAY DIFFRACTION99.9145
4.732-5.1110.2712310.2284163X-RAY DIFFRACTION99.8183
5.111-5.5980.291930.2473844X-RAY DIFFRACTION99.9505
5.598-6.2580.2951730.2593508X-RAY DIFFRACTION100
6.258-7.2250.281690.2563084X-RAY DIFFRACTION100
7.225-8.8450.221380.2082633X-RAY DIFFRACTION99.7121
8-100.21130.1812057X-RAY DIFFRACTION99.4956
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
10.7884-0.178-0.34690.05450.00462.4741-0.0373-0.0552-0.14990.0249-0.01030.01580.11530.13890.04760.04790.0034-0.01920.1470.00140.1417-111.3221-53.3913101.0916
20.56320.0644-0.210.61650.30971.8172-0.01610.1324-0.0013-0.06130.0258-0.0268-0.01670.089-0.00970.0071-0.0046-0.00640.18780.01580.1027-98.2771-53.506462.2588
31.12380.2213-0.33970.04820.0162.13040.0135-0.0761-0.08260.0095-0.0358-0.01370.1564-0.00750.02230.01460.0044-0.01150.1785-0.01220.0994-74.5844-56.290124.1667
40.58580.0821-0.41240.51680.07772.04310.01710.11970.0084-0.07250.02780.0388-0.1105-0.2295-0.0450.01580.012-0.00970.10880.00460.0928-63.4515-49.9414-14.7463
50.2297-0.458-0.32870.93760.55542.40870.0090.0458-0.0697-0.0347-0.0690.1509-0.1295-0.17680.060.09710.0291-0.02090.0556-0.00070.133-134.4433-38.809752.8333
60.83590.079-0.13860.4333-0.45861.7798-0.0067-0.11420.03250.11-0.02760.024-0.1214-0.08050.03430.0925-0.004-0.00320.03280.00020.0994-46.0069-38.721352.9373
70.21010.4088-0.07660.8154-0.32491.869-0.0454-0.0024-0.0502-0.1086-0.0133-0.08980.01820.09440.05870.1869-0.0222-0.00120.0178-0.02130.1094-35.9175-30.643514.1929
80.57560.2268-0.47390.92580.19882.42340.0371-0.0880.0530.1166-0.0178-0.0182-0.17930.0579-0.01930.19080.0373-0.02160.0239-0.00820.0922-139.9338-26.691791.6242
90.9601-0.16330.28990.651-0.11871.76760.0176-0.1314-0.00250.0478-0.00670.03330.0916-0.0054-0.01090.3124-0.04460.00710.02680.00940.1071-29.0576-7.4405-23.7155
100.0611-0.24370.26861.4064-0.26773.02330.02210.03880.0304-0.1187-0.0981-0.25140.15220.28030.0760.2491-0.00040.01590.03290.0080.167-25.68765.323-62.4189
Refinement TLS groupSelection: ALL

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