- PDB-1z6x: Structure Of Human ADP-Ribosylation Factor 4 -
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基本情報
登録情報
データベース: PDB / ID: 1z6x
タイトル
Structure Of Human ADP-Ribosylation Factor 4
要素
ADP-ribosylation factor 4
キーワード
TRANSPORT PROTEIN / GDP-BINDING / MEMBRANE TRAFFICKING / GOLGI STACK / LIPOPROTEIN / MYRISTATE / Structural Genomics / PSI / Protein Structure Initiative / Structural Genomics Consortium / SGC
機能・相同性
機能・相同性情報
: / activation of phospholipase D activity / VxPx cargo-targeting to cilium / dendritic spine development / apical protein localization / protein localization to cilium / retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum / establishment or maintenance of epithelial cell apical/basal polarity / regulation of reactive oxygen species metabolic process / COPI-dependent Golgi-to-ER retrograde traffic ...: / activation of phospholipase D activity / VxPx cargo-targeting to cilium / dendritic spine development / apical protein localization / protein localization to cilium / retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum / establishment or maintenance of epithelial cell apical/basal polarity / regulation of reactive oxygen species metabolic process / COPI-dependent Golgi-to-ER retrograde traffic / regulation of postsynapse organization / epidermal growth factor receptor binding / cilium assembly / response to axon injury / endoplasmic reticulum to Golgi vesicle-mediated transport / COPI-mediated anterograde transport / vesicle-mediated transport / guanyl-nucleotide exchange factor activity / learning / intracellular protein transport / epidermal growth factor receptor signaling pathway / brain development / ruffle membrane / cell migration / dendritic spine / GTPase activity / glutamatergic synapse / GTP binding / negative regulation of apoptotic process / Golgi apparatus / positive regulation of transcription by RNA polymerase II / extracellular exosome / membrane / plasma membrane / cytosol 類似検索 - 分子機能
small GTPase Arf family profile. / Sar1p-like members of the Ras-family of small GTPases / Small GTPase superfamily, ARF/SAR type / ADP-ribosylation factor family / Small GTP-binding protein domain / P-loop containing nucleotide triphosphate hydrolases / Rossmann fold / P-loop containing nucleoside triphosphate hydrolase / 3-Layer(aba) Sandwich / Alpha Beta 類似検索 - ドメイン・相同性
解像度: 2.7→32.38 Å / Cor.coef. Fo:Fc: 0.918 / Cor.coef. Fo:Fc free: 0.882 / 交差検証法: THROUGHOUT / ESU R Free: 0.422 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
反射数
%反射
Selection details
Rfree
0.27269
466
4.8 %
RANDOM
Rwork
0.22166
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obs
0.22419
9184
99.84 %
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all
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9651
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK