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Yorodumi- PDB-1xbl: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA ... -
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-Basic information
Entry | Database: PDB / ID: 1xbl | ||||||
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Title | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES | ||||||
Components | DNAJChaperone DnaJ | ||||||
Keywords | CHAPERONE / DNA REPLICATION / HEAT SHOCK | ||||||
Function / homology | Function and homology information sigma factor antagonist activity / protein disulfide isomerase activity / chaperone cofactor-dependent protein refolding / protein unfolding / protein-disulfide reductase activity / heat shock protein binding / viral process / unfolded protein binding / protein folding / response to heat ...sigma factor antagonist activity / protein disulfide isomerase activity / chaperone cofactor-dependent protein refolding / protein unfolding / protein-disulfide reductase activity / heat shock protein binding / viral process / unfolded protein binding / protein folding / response to heat / protein-folding chaperone binding / protein refolding / protein-containing complex assembly / DNA replication / protein homodimerization activity / protein-containing complex / zinc ion binding / ATP binding / membrane / cytosol / cytoplasm Similarity search - Function | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | SOLUTION NMR / REDAC | ||||||
Authors | Pellecchia, M. / Szyperski, T. / Wall, D. / Georgopoulos, C. / Wuthrich, K. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1996 Title: NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone. Authors: Pellecchia, M. / Szyperski, T. / Wall, D. / Georgopoulos, C. / Wuthrich, K. #1: Journal: Proc.Natl.Acad.Sci.USA / Year: 1994 Title: NMR Structure Determination of the Escherichia Coli Dnaj Molecular Chaperone: Secondary Structure and Backbone Fold of the N-Terminal Region (Residues 2-108) Containing the Highly Conserved J Domain Authors: Szyperski, T. / Pellecchia, M. / Wall, D. / Georgopoulos, C. / Wuthrich, K. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1xbl.cif.gz | 541.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1xbl.ent.gz | 474.8 KB | Display | PDB format |
PDBx/mmJSON format | 1xbl.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/xb/1xbl ftp://data.pdbj.org/pub/pdb/validation_reports/xb/1xbl | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 11846.043 Da / Num. of mol.: 1 Fragment: N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ Source method: isolated from a genetically manipulated source Source: (gene. exp.) Escherichia coli (E. coli) / Production host: Escherichia coli (E. coli) / References: UniProt: P08622 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: SEE PAPER *JRNL* |
-Sample preparation
Sample conditions | pH: 6.0 / Temperature: 301 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Bruker AMX / Manufacturer: Bruker / Model: AMX / Field strength: 600 MHz |
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-Processing
NMR software |
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Refinement | Method: REDAC / Software ordinal: 1 | |||||||||
NMR ensemble | Conformer selection criteria: TARGET FUNCTION (SEE PAPER *JRNL*) Conformers calculated total number: 50 / Conformers submitted total number: 20 |