登録情報 | データベース: PDB / ID: 1whu |
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タイトル | Solution structure of the alpha-helical domain from mouse hypothetical PNPase |
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要素 | polynucleotide phosphorylase; 3'-5' RNA exonuclease |
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キーワード | TRANSFERASE / Polynucleotide phosphorylase / PNPase / alpha-helical domain / 3'-5' RNA exonuclease / STRUCTURAL GENOMICS / RIKEN Structural Genomics/Proteomics Initiative / RSGI |
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機能・相同性 | 機能・相同性情報
RNA import into mitochondrion / regulation of cell cycle => GO:0051726 / mitochondrial mRNA polyadenylation / mitochondrial degradosome / mitochondrial mRNA catabolic process / positive regulation of mitochondrial RNA catabolic process / : / mitochondrial RNA 3'-end processing / : / mitochondrial RNA catabolic process ...RNA import into mitochondrion / regulation of cell cycle => GO:0051726 / mitochondrial mRNA polyadenylation / mitochondrial degradosome / mitochondrial mRNA catabolic process / positive regulation of mitochondrial RNA catabolic process / : / mitochondrial RNA 3'-end processing / : / mitochondrial RNA catabolic process / mitochondrial RNA 5'-end processing / positive regulation of miRNA catabolic process / : / polyribonucleotide nucleotidyltransferase / polyribonucleotide nucleotidyltransferase activity / poly(G) binding / mitochondrial RNA processing / nuclear polyadenylation-dependent mRNA catabolic process / positive regulation of mRNA catabolic process / regulation of cellular senescence / negative regulation of growth / rRNA import into mitochondrion / regulation of cellular respiration / poly(U) RNA binding / RNA catabolic process / response to growth hormone / miRNA binding / protein homotrimerization / mRNA catabolic process / cellular response to interferon-beta / response to cAMP / liver regeneration / protein homooligomerization / mitochondrial intermembrane space / cellular response to oxidative stress / 3'-5'-RNA exonuclease activity / mitochondrial matrix / endoplasmic reticulum membrane / mitochondrion / nucleus / cytoplasm / cytosol類似検索 - 分子機能 Polyribonucleotide nucleotidyltransferase, RNA-binding domain / Polyribonucleotide nucleotidyltransferase / Polyribonucleotide nucleotidyltransferase, RNA-binding domain / Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily / Polyribonucleotide nucleotidyltransferase, RNA binding domain / Exoribonuclease, phosphorolytic domain 2 / 3' exoribonuclease family, domain 2 / Exoribonuclease, phosphorolytic domain 1 / PNPase/RNase PH domain superfamily / Exoribonuclease, PH domain 2 superfamily ...Polyribonucleotide nucleotidyltransferase, RNA-binding domain / Polyribonucleotide nucleotidyltransferase / Polyribonucleotide nucleotidyltransferase, RNA-binding domain / Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily / Polyribonucleotide nucleotidyltransferase, RNA binding domain / Exoribonuclease, phosphorolytic domain 2 / 3' exoribonuclease family, domain 2 / Exoribonuclease, phosphorolytic domain 1 / PNPase/RNase PH domain superfamily / Exoribonuclease, PH domain 2 superfamily / 3' exoribonuclease family, domain 1 / KH domain / RNA-binding domain, S1 / K Homology domain, type 1 / Type-1 KH domain profile. / K Homology domain, type 1 superfamily / S1 domain profile. / Ribosomal protein S1-like RNA-binding domain / S1 RNA binding domain / S1 domain / K Homology domain / K homology RNA-binding domain / Arc Repressor Mutant, subunit A / Ribosomal protein S5 domain 2-type fold / Nucleic acid-binding, OB-fold / Orthogonal Bundle / Mainly Alpha類似検索 - ドメイン・相同性 Polyribonucleotide nucleotidyltransferase 1, mitochondrial類似検索 - 構成要素 |
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生物種 | ![](img/tx_mammal.gif) Mus musculus (ハツカネズミ) |
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手法 | 溶液NMR / torsion angle dynamics, simulated annealing |
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データ登録者 | Nagata, T. / Muto, Y. / Inoue, M. / Kigawa, T. / Terada, T. / Shirouzu, M. / Yokoyama, S. / RIKEN Structural Genomics/Proteomics Initiative (RSGI) |
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引用 | ジャーナル: To be Published タイトル: Solution structure of the alpha-helical domain from mouse hypothetical PNPase 著者: Nagata, T. / Muto, Y. / Inoue, M. / Kigawa, T. / Terada, T. / Shirouzu, M. / Yokoyama, S. |
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履歴 | 登録 | 2004年5月28日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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改定 1.0 | 2004年11月28日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2008年4月30日 | Group: Version format compliance |
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改定 1.2 | 2011年7月13日 | Group: Version format compliance |
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改定 1.3 | 2022年3月2日 | Group: Data collection / Database references / Derived calculations カテゴリ: database_2 / pdbx_nmr_software ...database_2 / pdbx_nmr_software / pdbx_nmr_spectrometer / pdbx_struct_assembly / pdbx_struct_oper_list / struct_ref_seq_dif Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_nmr_software.name / _pdbx_nmr_spectrometer.model / _struct_ref_seq_dif.details |
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改定 1.4 | 2024年5月29日 | Group: Data collection / カテゴリ: chem_comp_atom / chem_comp_bond |
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