[English] 日本語
Yorodumi- PDB-1shp: THE NMR SOLUTION STRUCTURE OF A KUNITZ-TYPE PROTEINASE INHIBITOR ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1shp | ||||||
---|---|---|---|---|---|---|---|
Title | THE NMR SOLUTION STRUCTURE OF A KUNITZ-TYPE PROTEINASE INHIBITOR FROM THE SEA ANEMONE STICHODACTYLA HELIANTHUS | ||||||
Components | TRYPSIN INHIBITOR | ||||||
Keywords | PROTEINASE INHIBITOR(TRYPSIN) | ||||||
Function / homology | Function and homology information nematocyst / aspartic-type endopeptidase inhibitor activity / serine-type endopeptidase inhibitor activity / extracellular region Similarity search - Function | ||||||
Biological species | Stichodactyla helianthus (sea anemone) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Antuch, W. / Berndt, K. / Chavez, M. / Delfin, J. / Wuthrich, K. | ||||||
Citation | Journal: Eur.J.Biochem. / Year: 1993 Title: The NMR solution structure of a Kunitz-type proteinase inhibitor from the sea anemone Stichodactyla helianthus. Authors: Antuch, W. / Berndt, K.D. / Chavez, M.A. / Delfin, J. / Wuthrich, K. #1: Journal: To be Published Title: Amino Acid Sequence and Three-Dimensional Model of a Serine Proteinase Inhibitor from Stichodactyla Helianthus Authors: Antuch, W. / Dominguez, R. / Rodriguez, R. / Delfin, J. / Morera, V. / Diaz, J. / Chavez, M. / Dideberg, O. / Padron, G. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 1shp.cif.gz | 355.5 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb1shp.ent.gz | 313.8 KB | Display | PDB format |
PDBx/mmJSON format | 1shp.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1shp_validation.pdf.gz | 350 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 1shp_full_validation.pdf.gz | 458.2 KB | Display | |
Data in XML | 1shp_validation.xml.gz | 16.6 KB | Display | |
Data in CIF | 1shp_validation.cif.gz | 28.9 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/sh/1shp ftp://data.pdbj.org/pub/pdb/validation_reports/sh/1shp | HTTPS FTP |
-Related structure data
Similar structure data |
---|
-Links
-Assembly
Deposited unit |
| |||||||||
---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||
Atom site foot note | 1: LYS 27 - CYS 28 MODEL 1 OMEGA =148.03 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 2: PRO 6 - LYS 7 MODEL 3 OMEGA =149.60 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 3: ARG 54 - ALA 55 MODEL 3 OMEGA =148.01 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 4: ASN 41 - ASN 42 MODEL 4 OMEGA =211.40 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 5: ARG 54 - ALA 55 MODEL 5 OMEGA =139.40 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 6: ARG 54 - ALA 55 MODEL 13 OMEGA =148.76 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 7: ASN 41 - ASN 42 MODEL 16 OMEGA =213.09 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 8: SER 1 - ILE 2 MODEL 18 OMEGA =212.95 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION 9: ARG 54 - ALA 55 MODEL 20 OMEGA =117.86 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION | |||||||||
NMR ensembles |
|
-Components
#1: Protein | Mass: 6124.990 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Stichodactyla helianthus (sea anemone) / References: UniProt: P31713 |
---|
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
---|
-Processing
NMR software |
| |||||||||
---|---|---|---|---|---|---|---|---|---|---|
NMR ensemble | Conformers submitted total number: 20 |