[English] 日本語
![](img/lk-miru.gif)
- PDB-1ptg: PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C IN COMPLEX WITH MYO... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1ptg | ||||||
---|---|---|---|---|---|---|---|
Title | PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C IN COMPLEX WITH MYO-INOSITOL | ||||||
![]() | PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C | ||||||
![]() | HYDROLASE (PHOSPHORIC DIESTER) / HYDROLASE / PHOSPHATIDYLINOSITOL SPECIFIC PHOSPHOLIPASE C / MYO-INOSITOL / INHIBITOR COMPLEX | ||||||
Function / homology | ![]() phosphatidylinositol diacylglycerol-lyase / phosphatidylinositol diacylglycerol-lyase activity / phosphoric diester hydrolase activity / lipid catabolic process / extracellular region Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() | ||||||
![]() | Heinz, D.W. / Ryan, M. / Bullock, T.L. / Griffith, O.H. | ||||||
![]() | ![]() Title: Crystal structure of the phosphatidylinositol-specific phospholipase C from Bacillus cereus in complex with myo-inositol. Authors: Heinz, D.W. / Ryan, M. / Bullock, T.L. / Griffith, O.H. #1: ![]() Title: Crystallization of Phosphatidylinositol-Specific Phospholipase C from Bacillus Cereus Authors: Bullock, T.L. / Ryan, M. / Kim, S.L. / Remington, S.J. / Griffith, O.H. #2: ![]() Title: Phosphatidylinositol-Specific Phospholipase C of Bacillus Cereus: Cloning, Sequencing, and Relationship to Other Phospholipases Authors: Kuppe, A. / Evans, L.M. / Mcmillen, D.A. / Griffith, O.H. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 71.9 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 54.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 380.4 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 389.2 KB | Display | |
Data in XML | ![]() | 8.3 KB | Display | |
Data in CIF | ![]() | 12 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
|
-
Components
#1: Protein | Mass: 34568.664 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() |
---|---|
#2: Chemical | ChemComp-INS / |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 2.4 Å3/Da / Density % sol: 45 % |
---|
-Data collection
Diffraction source | Wavelength: 1.5418 |
---|---|
Detector | Type: SIEMENS / Detector: AREA DETECTOR / Date: 1994 |
Radiation | Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Resolution: 2.5→20 Å / Num. obs: 10300 / % possible obs: 78 % / Observed criterion σ(I): 1 / Redundancy: 3 % / Rmerge(I) obs: 0.045 |
-
Processing
Software |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Method to determine structure: ![]()
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | Biso mean: 19.5 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine analyze | Luzzati coordinate error obs: 0.32 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.6→8 Å
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints |
|