[English] 日本語
Yorodumi- PDB-1ok4: Archaeal fructose 1,6-bisphosphate aldolase covalently bound to t... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1ok4 | ||||||
---|---|---|---|---|---|---|---|
Title | Archaeal fructose 1,6-bisphosphate aldolase covalently bound to the substrate dihydroxyacetone phosphate | ||||||
Components | FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I | ||||||
Keywords | LYASE / ALDOLASE / FRUCTOSE 1 / 6-BISPHOSPHATE / TIM BARREL / GLYCOLYTIC / ARCHAEAL | ||||||
Function / homology | Function and homology information fructose-bisphosphate aldolase / fructose-bisphosphate aldolase activity / glycolytic process / cytoplasm Similarity search - Function | ||||||
Biological species | THERMOPROTEUS TENAX (archaea) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.1 Å | ||||||
Authors | Lorentzen, E. / Zwart, P. / Stark, A. / Hensel, R. / Siebers, B. / Pohl, E. | ||||||
Citation | Journal: J. Biol. Chem. / Year: 2003 Title: Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins. Authors: Lorentzen, E. / Pohl, E. / Zwart, P. / Stark, A. / Russell, R.B. / Knura, T. / Hensel, R. / Siebers, B. | ||||||
History |
| ||||||
Remark 700 | SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" "BA" "CA" IN EACH CHAIN ON SHEET ... SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AA" "BA" "CA" IN EACH CHAIN ON SHEET RECORD BELOW ARE ACTUALLY 9-STRANDED BARRELS THESE ARE REPRESENTED BY 10-STRANDED SHEETS IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. THE SHEETS PRESENTED AS "DA" "EA" "FA" "GA" "HA" "IA" "JA" IN EACH CHAIN ON SHEET RECORDS BELOW ARE ACTUALLY 7-STRANDED BARRELS THESE ARE REPRESENTED BY 8-STRANDED SHEETS IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. |
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 1ok4.cif.gz | 482.9 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb1ok4.ent.gz | 398.5 KB | Display | PDB format |
PDBx/mmJSON format | 1ok4.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1ok4_validation.pdf.gz | 521.6 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 1ok4_full_validation.pdf.gz | 547.1 KB | Display | |
Data in XML | 1ok4_validation.xml.gz | 90 KB | Display | |
Data in CIF | 1ok4_validation.cif.gz | 119.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ok/1ok4 ftp://data.pdbj.org/pub/pdb/validation_reports/ok/1ok4 | HTTPS FTP |
-Related structure data
Related structure data | 1ojxSC 1ok6C S: Starting model for refinement C: citing same article (ref.) |
---|---|
Similar structure data |
-Links
-Assembly
Deposited unit |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unit cell |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1 / Refine code: 2
|