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- PDB-1mt3: Crystal Structure of the Tricorn Interacting Factor Selenomethion... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1mt3 | ||||||
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Title | Crystal Structure of the Tricorn Interacting Factor Selenomethionine-F1 | ||||||
![]() | Proline iminopeptidase | ||||||
![]() | HYDROLASE / ALPHA-BETA HYDROLASE / CAP DOMAIN / CAGED ACTIVE SITE / PROLYLPEPTIDASE | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Goettig, P. / Groll, M. / Kim, J.-S. / Huber, R. / Brandstetter, H. | ||||||
![]() | ![]() Title: Structures of the tricorn-interacting aminopeptidase F1 with different ligands explain its catalytic mechanism Authors: Goettig, P. / Groll, M. / Kim, J.-S. / Huber, R. / Brandstetter, H. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 69.3 KB | Display | ![]() |
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PDB format | ![]() | 55.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 429.1 KB | Display | ![]() |
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Full document | ![]() | 444 KB | Display | |
Data in XML | ![]() | 15.4 KB | Display | |
Data in CIF | ![]() | 20.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 |
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Unit cell |
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Details | The biological assembly is the monomer in the asymmetric unit. |
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Components
#1: Protein | Mass: 33952.141 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() |
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#2: Chemical | ChemComp-MES / |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 1.88 Å3/Da / Density % sol: 34.4 % | ||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | Temperature: 293 K / Method: vapor diffusion, hanging drop / pH: 6 Details: 12% PEG 6000, 100 mM MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K | ||||||||||||||||||||||||||||||||||||||||||
Crystal grow | *PLUS Method: vapor diffusion | ||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 100 K | ||||||||||||
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Diffraction source | Source: ![]() ![]() | ||||||||||||
Detector | Type: MARRESEARCH / Detector: CCD / Date: Sep 4, 2001 | ||||||||||||
Radiation | Monochromator: Si 111 DOUBLE-CRYSTAL / Protocol: MAD / Monochromatic (M) / Laue (L): M / Scattering type: x-ray | ||||||||||||
Radiation wavelength |
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Reflection | Resolution: 2→20 Å / Num. all: 33131 / Biso Wilson estimate: 33.3 Å2 / Rmerge(I) obs: 0.064 / Net I/σ(I): 24.6 | ||||||||||||
Reflection | *PLUS Lowest resolution: 20 Å / Num. obs: 33131 / % possible obs: 99 % |
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Processing
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Refinement | Method to determine structure: ![]()
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Refinement step | Cycle: LAST / Resolution: 2→20 Å
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Refine LS restraints |
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Refinement | *PLUS Rfactor Rfree: 0.28 | |||||||||||||||||||||||||
Solvent computation | *PLUS | |||||||||||||||||||||||||
Displacement parameters | *PLUS | |||||||||||||||||||||||||
Refine LS restraints | *PLUS
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