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Yorodumi- PDB-1lrp: COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1lrp | |||||||||
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Title | COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA | |||||||||
Components | LAMBDA REPRESSOR | |||||||||
Keywords | DNA BINDING REGULATORY PROTEIN | |||||||||
Function / homology | Function and homology information maintenance of viral latency / latency-replication decision / positive regulation of viral transcription / negative regulation of transcription by competitive promoter binding / core promoter sequence-specific DNA binding / identical protein binding Similarity search - Function | |||||||||
Biological species | Enterobacteria phage lambda (virus) | |||||||||
Method | X-RAY DIFFRACTION / Resolution: 3.2 Å | |||||||||
Authors | Pabo, C. / Lewis, M. | |||||||||
Citation | Journal: J.Mol.Biol. / Year: 1983 Title: Comparison of the structures of cro and lambda repressor proteins from bacteriophage lambda. Authors: Ohlendorf, D.H. / Anderson, W.F. / Lewis, M. / Pabo, C.O. / Matthews, B.W. #1: Journal: Cold Spring Harbor Symp.Quant.Biol. / Year: 1983 Title: Structure of the Operator-Binding Domain of Bacteriophage Lambda Repressor. Implications for DNA Recognition and Gene Regulation Authors: Lewis, M. / Jeffrey, A. / Wang, J. / Ladner, R. / Ptashne, M. / Pabo, C.O. #2: Journal: Nature / Year: 1982 Title: Homology Among DNA-Binding Proteins Suggests Use of a Conserved Super-Secondary Structure Authors: Sauer, R.T. / Yocum, R.R. / Doolittle, R.F. / Lewis, M. / Pabo, C.O. #3: Journal: Nature / Year: 1982 Title: The Operator-Binding Domain of Lambda Repressor. Structure and DNA Recognition Authors: Pabo, C.O. / Lewis, M. #4: Journal: Nature / Year: 1982 Title: The N-Terminal Arms of Lambda Repressor Wrap Around the Operator DNA Authors: Pabo, C.O. / Krovatin, W. / Jeffrey, A. / Sauer, R.T. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1lrp.cif.gz | 18 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1lrp.ent.gz | 9.1 KB | Display | PDB format |
PDBx/mmJSON format | 1lrp.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1lrp_validation.pdf.gz | 315.2 KB | Display | wwPDB validaton report |
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Full document | 1lrp_full_validation.pdf.gz | 315.1 KB | Display | |
Data in XML | 1lrp_validation.xml.gz | 722 B | Display | |
Data in CIF | 1lrp_validation.cif.gz | 3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lr/1lrp ftp://data.pdbj.org/pub/pdb/validation_reports/lr/1lrp | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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2 |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS oper:
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Details | THE REPRESSOR MOLECULE CONSISTS OF A DIMER, AND COORDINATES FOR THE SYMMETRY RELATED CHAIN CAN BE GENERATED FROM THE CHAIN PRESENTED IN THIS ENTRY BY 1.0 0.0 0.0 0.0 0.0 -1.0 0.0 0.0 0.0 0.0 -1.0 0.0 |
-Components
#1: Protein | Mass: 10136.613 Da / Num. of mol.: 3 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Enterobacteria phage lambda (virus) / Genus: Lambda-like viruses / References: UniProt: P03034 |
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-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 3 Å3/Da / Density % sol: 58.99 % |
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Crystal grow | *PLUS Method: unknown |
-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
-Processing
Refinement | Highest resolution: 3.2 Å | ||||||||||||
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Refinement step | Cycle: LAST / Highest resolution: 3.2 Å
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Refinement | *PLUS Highest resolution: 3.2 Å | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS |