[English] 日本語
![](img/lk-miru.gif)
- PDB-1etu: STRUCTURAL DETAILS OF THE BINDING OF GUANOSINE DIPHOSPHATE TO ELO... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1etu | ||||||
---|---|---|---|---|---|---|---|
Title | STRUCTURAL DETAILS OF THE BINDING OF GUANOSINE DIPHOSPHATE TO ELONGATION FACTOR TU FROM E. COLI AS STUDIED BY X-RAY CRYSTALLOGRAPHY | ||||||
![]() | ELONGATION FACTOR TU | ||||||
![]() | TRANSPORT AND PROTECTION PROTEIN | ||||||
Function / homology | ![]() guanyl-nucleotide exchange factor complex / guanosine tetraphosphate binding / translational elongation / translation elongation factor activity / response to antibiotic / GTPase activity / GTP binding / RNA binding / plasma membrane / cytoplasm Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Clark, B.F.C. / Lacour, T.F.M. / Kjeldgaard, M. / Morikawa, K. / Nyborg, J. / Rubin, R. / Thirup, S. | ||||||
![]() | ![]() Title: Structural details of the binding of guanosine diphosphate to elongation factor Tu from E. coli as studied by X-ray crystallography. Authors: la Cour, T.F. / Nyborg, J. / Thirup, S. / Clark, B.F. #1: ![]() Title: A Model for the Tertiary Structure of P21, the Product of the Ras Oncogene Authors: Mccormick, F. / Clark, B.F.C. / Lacour, T.F.M. / Kjeldgaard, M. / Norskov-Lauritsen, L. / Nyborg, J. #2: ![]() Year: 1984 Title: Structure of Bacterial Elongation Factor EF-TU and its Interaction with Aminoacyl-tRNA Authors: Clark, B.F.C. / Lacour, T.F.M. / Nielsen, K.M. / Nyborg, J. / Petersen, H.U. / Siboska, G.E. / Wikman, F.P. #3: ![]() Title: Structural Features of the Gdp Binding Site of Elongation Factor TU from Escherichia Coli as Determined by X-Ray Diffraction Authors: Rubin, J.R. / Morikawa, K. / Nyborg, J. / Lacour, T.F.M. / Clark, B.F.C. / Miller, D.L. #4: ![]() Title: High Resolution X-Ray Crystallographic Analysis of a Modified Form of the Elongation Factor TU(Colon) Guanosine Diphosphate Complex Authors: Morikawa, K. / Lacour, T.F.M. / Nyborg, J. / Rasmussen, K.M. / Miller, D.L. / Clark, B.F.C. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 51.4 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 33 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
---|
-Related structure data
Similar structure data |
---|
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
| ||||||||
Atom site foot note | 1: SEE REMARK 5. |
-
Components
#1: Protein | Mass: 43209.270 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
---|---|
#2: Chemical | ChemComp-MG / |
#3: Chemical | ChemComp-GDP / |
Sequence details | EF-TU IS CODED FOR BY TWO DIFFERENT GENES. THE SEQUENCE STRUCTURE ANALYSIS CARRIED OUT ON THIS ...EF-TU IS CODED FOR BY TWO DIFFERENT GENES. THE SEQUENCE STRUCTURE ANALYSIS CARRIED OUT ON THIS MIXTURE SHOWS THAT THE C-TERMINAL RESIDUE OCCURS AS GLY/SER IN THE RATIO OF 3/1. THIS RESIDUE IS IDENTIFIED |
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 4.6 Å3/Da / Density % sol: 73.26 % | ||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Crystal grow | *PLUS pH: 7 / Method: vapor diffusion / Details: referred to J.Mol.Biol. 125.325-338 | ||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
|
-
Processing
Refinement | Highest resolution: 2.9 Å Details: ATOMS WITH AN OCCUPANCY OF 0.0 ARE POORLY DEFINED IN THE DENSITY. | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement step | Cycle: LAST / Highest resolution: 2.9 Å
|