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Yorodumi- PDB-1etf: REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, M... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1etf | ||||||
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Title | REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, MINIMIZED AVERAGE STRUCTURE | ||||||
Components |
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Keywords | Viral protein/RNA / COMPLEX (RNA-PEPTIDE) / EXPORT REGULATOR / MRNA SPLICING / TRANSCRIPTION REGULATION / Viral protein-RNA COMPLEX | ||||||
Function / homology | Function and homology information host cell nucleolus / mRNA transport / host cell cytoplasm / DNA-binding transcription factor activity / RNA binding Similarity search - Function | ||||||
Biological species | Human immunodeficiency virus 1 | ||||||
Method | SOLUTION NMR | ||||||
Authors | Battiste, J.L. / Mao, H. / Rao, N.S. / Tan, R. / Muhandiram, D.R. / Kay, L.E. / Frankel, A.D. / Willamson, J.R. | ||||||
Citation | Journal: Science / Year: 1996 Title: Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex. Authors: Battiste, J.L. / Mao, H. / Rao, N.S. / Tan, R. / Muhandiram, D.R. / Kay, L.E. / Frankel, A.D. / Williamson, J.R. #1: Journal: J.Biomol.NMR / Year: 1995 Title: Assignment and Modeling of the Rev Response Element RNA Bound to a Rev Peptide Using 13C-Heteronuclear NMR Authors: Battiste, J.L. / Tan, R. / Frankel, A.D. / Williamson, J.R. #2: Journal: Biochemistry / Year: 1994 Title: Binding of an HIV Rev Peptide to Rev Responsive Element RNA Induces Formation of Purine-Purine Base Pairs Authors: Battiste, J.L. / Tan, R. / Frankel, A.D. / Williamson, J.R. #3: Journal: Cell(Cambridge,Mass.) / Year: 1993 Title: RNA Recognition by an Isolated Alpha Helix Authors: Tan, R. / Chen, L. / Buettner, J.A. / Hudson, D. / Frankel, A.D. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1etf.cif.gz | 42.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1etf.ent.gz | 28.7 KB | Display | PDB format |
PDBx/mmJSON format | 1etf.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/et/1etf ftp://data.pdbj.org/pub/pdb/validation_reports/et/1etf | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: RNA chain | Mass: 11039.639 Da / Num. of mol.: 1 / Source method: obtained synthetically |
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#2: Protein/peptide | Mass: 3004.411 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Human immunodeficiency virus 1 / Genus: Lentivirus / Production host: Escherichia coli (E. coli) / References: UniProt: P05866 |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-Processing
NMR software | Name: INSIGHT/DISCOVER / Developer: BIOSYM / Classification: refinement |
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NMR ensemble | Conformers submitted total number: 1 |