+Open data
-Basic information
Entry | Database: PDB / ID: 1dsj | ||||||
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Title | NMR SOLUTION STRUCTURE OF VPR50_75, 20 STRUCTURES | ||||||
Components | VPR PROTEIN | ||||||
Keywords | VIRAL PEPTIDE / POLYPEPTIDE | ||||||
Function / homology | Function and homology information symbiont-mediated arrest of host cell cycle during G2/M transition / monoatomic ion transmembrane transport / : / virion component / protein homooligomerization / viral penetration into host nucleus / host extracellular space / symbiont entry into host cell / cell cycle / DNA-templated transcription ...symbiont-mediated arrest of host cell cycle during G2/M transition / monoatomic ion transmembrane transport / : / virion component / protein homooligomerization / viral penetration into host nucleus / host extracellular space / symbiont entry into host cell / cell cycle / DNA-templated transcription / host cell nucleus / regulation of DNA-templated transcription Similarity search - Function | ||||||
Biological species | Human immunodeficiency virus 1 | ||||||
Method | SOLUTION NMR | ||||||
Authors | Yao, S. / Torres, A.M. / Azad, A.A. / Macreadie, I.G. / Norton, R.S. | ||||||
Citation | Journal: Protein Pept.Lett. / Year: 1998 Title: Helical structure of polypeptides from the C-terminal half of HIV-1 VPR. Authors: Yao, S.G. / Azad, A.A. / Macreadie, I.G. / Norton, R.S. #1: Journal: Proc.Natl.Acad.Sci.USA / Year: 1996 Title: Vpr Protein of Human Immunodeficiency Virus Type 1 Forms Cation-Selective Channels in Planar Lipid Bilayers Authors: Piller, S.C. / Ewart, G.D. / Premkumar, A. / Cox, G.B. / Gage, P.W. #2: Journal: Proc.Natl.Acad.Sci.USA / Year: 1995 Title: A Domain of Human Immunodeficiency Virus Type 1 Vpr Containing Repeated H(S/F)Rig Amino Acid Motifs Causes Cell Growth Arrest and Structural Defects Authors: Macreadie, I.G. / Castelli, L.A. / Hewish, D.R. / Kirkpatrick, A. / Ward, A.C. / Azad, A.A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1dsj.cif.gz | 176.2 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1dsj.ent.gz | 152.6 KB | Display | PDB format |
PDBx/mmJSON format | 1dsj.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ds/1dsj ftp://data.pdbj.org/pub/pdb/validation_reports/ds/1dsj | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 3057.594 Da / Num. of mol.: 1 / Fragment: RESIDUES 50 - 75 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Human immunodeficiency virus 1 / Genus: Lentivirus / References: UniProt: P12520 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Sample conditions | pH: 3.3 / Temperature: 298 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-Processing
Software |
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NMR software | Name: X-PLOR / Version: 3.1 / Developer: BRUNGER / Classification: refinement | ||||||||||||
NMR ensemble | Conformers submitted total number: 20 |