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- PDB-1cur: REDUCED RUSTICYANIN, NMR -

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Basic information

Entry
Database: PDB / ID: 1cur
TitleREDUCED RUSTICYANIN, NMR
ComponentsCU(I) RUSTICYANIN
KeywordsELECTRON TRANSPORT / RUSTICYANIN / TYPE 1 COPPER PROTEIN / SOLUTION STRUCTURE
Function / homology
Function and homology information


periplasmic space / electron transfer activity / copper ion binding
Similarity search - Function
Rusticyanin / Multicopper oxidases, conserved site / Multicopper oxidases signature 1. / Blue (type 1) copper domain / Copper binding proteins, plastocyanin/azurin family / Blue (type 1) copper protein, binding site / Type-1 copper (blue) proteins signature. / Cupredoxins - blue copper proteins / Cupredoxin / Immunoglobulin-like ...Rusticyanin / Multicopper oxidases, conserved site / Multicopper oxidases signature 1. / Blue (type 1) copper domain / Copper binding proteins, plastocyanin/azurin family / Blue (type 1) copper protein, binding site / Type-1 copper (blue) proteins signature. / Cupredoxins - blue copper proteins / Cupredoxin / Immunoglobulin-like / Sandwich / Mainly Beta
Similarity search - Domain/homology
COPPER (II) ION / Rusticyanin / Rusticyanin
Similarity search - Component
Biological speciesAcidithiobacillus ferrooxidans (bacteria)
MethodSOLUTION NMR
AuthorsBotuyan, M.V. / Dyson, H.J.
Citation
Journal: J.Mol.Biol. / Year: 1996
Title: NMR solution structure of Cu(I) rusticyanin from Thiobacillus ferrooxidans: structural basis for the extreme acid stability and redox potential.
Authors: Botuyan, M.V. / Toy-Palmer, A. / Chung, J. / Blake 2nd., R.C. / Beroza, P. / Case, D.A. / Dyson, H.J.
#1: Journal: FEBS Lett. / Year: 1995
Title: Complete 13C Assignments for Recombinant Cu(I) Rusticyanin. Prediction of Secondary Structure from Patterns of Chemical Shifts
Authors: Toy-Palmer, A. / Prytulla, S. / Dyson, H.J.
#2: Journal: Biochemistry / Year: 1995
Title: Gene Synthesis, High-Level Expression, and Mutagenesis of Thiobacillus Ferrooxidans Rusticyanin: His 85 is a Ligand to the Blue Copper Center
Authors: Casimiro, D.R. / Toy-Palmer, A. / Blake II, R.C. / Dyson, H.J.
#3: Journal: J.Mol.Biol. / Year: 1994
Title: Nuclear Magnetic Resonance 15N and 1H Resonance Assignments and Global Fold of Rusticyanin
Authors: Hunt, A.H. / Toy-Palmer, A. / Assa-Munt, N. / Cavanagh, J. / Blake II, R.C. / Dyson, H.J.
History
DepositionApr 19, 1996Processing site: BNL
Revision 1.0Nov 8, 1996Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Feb 16, 2022Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_nmr_software / pdbx_struct_assembly / pdbx_struct_oper_list / struct_conn / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site / _pdbx_nmr_software.name / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id
Revision 1.4May 22, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: CU(I) RUSTICYANIN
hetero molecules


Theoretical massNumber of molelcules
Total (without water)16,6332
Polymers16,5701
Non-polymers641
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)15 / -
Representative

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Components

#1: Protein CU(I) RUSTICYANIN / REDUCED RUSTICYANIN


Mass: 16569.920 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Acidithiobacillus ferrooxidans (bacteria)
Description: PART OF NMR DATA ACQUIRED WITH LABELED NATIVE MATERIAL FROM THIOBACILLUS FERROOXIDANS, AND PART WITH RECOMBINANT MATERIAL FROM ESCHERICHIA COLI
Species (production host): Escherichia coli / Production host: Escherichia coli BL21(DE3) (bacteria) / Strain (production host): BL21 (DE3) / References: UniProt: P24930, UniProt: P0C918*PLUS
#2: Chemical ChemComp-CU / COPPER (II) ION


Mass: 63.546 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: Cu

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

NMR softwareName: Amber / Developer: FERGUSON,SIEBEL,SINGH,WEINER,KOLLMAN / Classification: refinement
NMR ensembleConformers submitted total number: 15

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