+Open data
-Basic information
Entry | Database: PDB / ID: 1co0 | ||||||
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Title | NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX | ||||||
Components |
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Keywords | TRANSCRIPTION / TRANSCRIPTION REGULATION / REPRESSOR / DNA-BINDING / TRP / DNA | ||||||
Function / homology | Function and homology information sequence-specific DNA binding / DNA-binding transcription factor activity / negative regulation of DNA-templated transcription / regulation of DNA-templated transcription / DNA binding / cytoplasm Similarity search - Function | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Zhou, G.P. / Brocchieri, L. / Jardetzky, O. | ||||||
Citation | Journal: Structures and Mechanisms, ACS Symposium Series / Year: 2002 Title: Allostery and Induced Fit, NMR and Molecular Modeling Study of the trp-repressor - mtr DNA complex Authors: Brocchieri, L. / Zhou, G.P. / Jardetzky, O. #1: Journal: J.Mol.Biol. / Year: 1994 Title: The Solution Structures of the Trp Repressor-Operator DNA Complex Authors: Zhang, H. / Zhao, D. / Revington, M. / Lee, W. / Jia, X. / Arrowsmith, C. / Jardetzky, O. #2: Journal: J.Mol.Biol. / Year: 1993 Title: Refined Solution Structures of the Escherichia Coli Trp Holo-and Aporepressor Authors: Zhao, D. / Arrowsmith, C.H. / Jia, X. / Jardetzky, O. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1co0.cif.gz | 1.4 MB | Display | PDBx/mmCIF format |
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PDB format | pdb1co0.ent.gz | 1.1 MB | Display | PDB format |
PDBx/mmJSON format | 1co0.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/co/1co0 ftp://data.pdbj.org/pub/pdb/validation_reports/co/1co0 | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: DNA chain | Mass: 6139.976 Da / Num. of mol.: 1 / Source method: obtained synthetically / Details: TRP OPERON SEQUENCE FROM ESCHERICHIA COLI | ||
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#2: DNA chain | Mass: 6126.994 Da / Num. of mol.: 1 / Source method: obtained synthetically / Details: TRP OPERON SEQUENCE FROM ESCHERICHIA COLI | ||
#3: Protein | Mass: 12238.934 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Escherichia coli (E. coli) / Production host: Escherichia coli (E. coli) / Strain (production host): CY15070,CY17071 / References: UniProt: P0A881 #4: Chemical | |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Sample conditions | pH: 5.7 / Temperature units: K |
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-Processing
NMR software |
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NMR ensemble | Conformer selection criteria: LEAST RESTRAINT VIOLATION / Conformers calculated total number: 30 / Conformers submitted total number: 15 |