+
Open data
Loading...
-
Basic information
| Entry | ![]() | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Title | ABCE1-eRF1-RNC-AMD1C | |||||||||||||||
Map data | ||||||||||||||||
Sample |
| |||||||||||||||
Keywords | AMD1 / ribosome stalling / arresting peptide / eRF1 / ABCE1 / Ribosome | |||||||||||||||
| Function / homology | Function and homology informationregulation of macromolecule metabolic process / translation termination factor activity / translation release factor complex / regulation of translational termination / ribosomal subunit / translation release factor activity / sequence-specific mRNA binding / ribosome disassembly / peptidyl-tRNA hydrolase activity / nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ...regulation of macromolecule metabolic process / translation termination factor activity / translation release factor complex / regulation of translational termination / ribosomal subunit / translation release factor activity / sequence-specific mRNA binding / ribosome disassembly / peptidyl-tRNA hydrolase activity / nuclear-transcribed mRNA catabolic process, nonsense-mediated decay / laminin receptor activity / ubiquitin ligase inhibitor activity / 90S preribosome / positive regulation of signal transduction by p53 class mediator / phagocytic cup / rough endoplasmic reticulum / laminin binding / ribosomal small subunit export from nucleus / translation regulator activity / gastrulation / MDM2/MDM4 family protein binding / cytosolic ribosome / class I DNA-(apurinic or apyrimidinic site) endonuclease activity / DNA-(apurinic or apyrimidinic site) lyase / ribosomal large subunit biogenesis / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / positive regulation of apoptotic signaling pathway / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of SSU-rRNA / small-subunit processome / spindle / cytoplasmic ribonucleoprotein granule / rRNA processing / positive regulation of canonical Wnt signaling pathway / rhythmic process / antimicrobial humoral immune response mediated by antimicrobial peptide / regulation of translation / large ribosomal subunit / ribosome binding / virus receptor activity / ribosomal small subunit biogenesis / ribosomal small subunit assembly / ribosomal large subunit assembly / 5S rRNA binding / small ribosomal subunit / small ribosomal subunit rRNA binding / cytosolic small ribosomal subunit / large ribosomal subunit rRNA binding / cytosolic large ribosomal subunit / killing of cells of another organism / defense response to Gram-negative bacterium / perikaryon / cytoplasmic translation / cell differentiation / tRNA binding / mitochondrial inner membrane / negative regulation of translation / rRNA binding / postsynaptic density / structural constituent of ribosome / ribosome / translation / ribonucleoprotein complex / cell division / DNA repair / mRNA binding / apoptotic process / dendrite / synapse / centrosome / nucleolus / perinuclear region of cytoplasm / endoplasmic reticulum / Golgi apparatus / ATP hydrolysis activity / DNA binding / RNA binding / zinc ion binding / ATP binding / nucleus / plasma membrane / cytoplasm / cytosol Similarity search - Function RLI, domain 1 / RLI1 / RNase L inhibitor RLI-like, possible metal-binding domain / Possible Fer4-like domain in RNase L inhibitor, RLI / Peptide chain release factor eRF1/aRF1 / eRF1, domain 1 / eRF1 domain 2 / eRF1 domain 2 / eRF1 domain 1/Pelota-like / eRF1 domain 3 ...RLI, domain 1 / RLI1 / RNase L inhibitor RLI-like, possible metal-binding domain / Possible Fer4-like domain in RNase L inhibitor, RLI / Peptide chain release factor eRF1/aRF1 / eRF1, domain 1 / eRF1 domain 2 / eRF1 domain 2 / eRF1 domain 1/Pelota-like / eRF1 domain 3 / eRF1, domain 2 superfamily / eRF1 domain 1 / eRF1 domain 3 / eRF1_1 / 4Fe-4S binding domain / 60s Acidic ribosomal protein / 60S acidic ribosomal protein P0 / : / 40S ribosomal protein SA / 40S ribosomal protein SA, C-terminal domain / 40S ribosomal protein SA C-terminus / Ribosomal protein L6, N-terminal / Ribosomal protein L6, N-terminal domain / Ubiquitin-like protein FUBI / Ribosomal protein L30e / 50S ribosomal protein L10, insertion domain superfamily / Ribosomal protein L28e / Ribosomal L15/L27a, N-terminal / 60S ribosomal protein L10P, insertion domain / Insertion domain in 60S ribosomal protein L10P / Ribosomal protein L23 / Ribosomal protein L2, archaeal-type / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / metallochaperone-like domain / TRASH domain / Ribosomal protein L41 / Ribosomal protein L41 / Ribosomal protein S21e, conserved site / Ribosomal protein S21e signature. / : / Ribosomal protein S12e signature. / Ribosomal protein S12e / Ribosomal protein L29e / Ribosomal L29e protein family / Small (40S) ribosomal subunit Asc1/RACK1 / Ribosomal protein L27e, conserved site / Ribosomal protein L27e signature. / Ribosomal protein S21e / Ribosomal protein S21e superfamily / Ribosomal protein S21e / Ribosomal protein S2, eukaryotic / Ribosomal protein S19e, conserved site / Ribosomal protein S19e signature. / S27a-like superfamily / Ribosomal protein L10e, conserved site / : / Ribosomal protein L10e signature. / Ribosomal protein L6e signature. / Ribosomal protein L44e signature. / 40S Ribosomal protein S10 / 60S ribosomal protein L18a/ L20, eukaryotes / Ribosomal protein L10e / Ribosomal protein L24e, conserved site / Ribosomal protein L24e signature. / Plectin/S10, N-terminal / Plectin/S10 domain / Ribosomal protein L34e, conserved site / Ribosomal protein L34e signature. / Ribosomal protein L5 eukaryotic, C-terminal / Ribosomal L18 C-terminal region / Ribosomal protein S30 / Ribosomal protein S30 / Ribosomal protein S10, eukaryotic/archaeal / : / Ribosomal protein L23/L25, N-terminal / Ribosomal protein L23, N-terminal domain / : / Ribosomal L40e family / Ribosomal protein S7e signature. / Ribosomal protein S27a / Ribosomal protein S27a / Ribosomal protein S27a / Ribosomal protein L30e signature 1. / Ribosomal protein L36e signature. / Ribosomal protein S25 / S25 ribosomal protein / Ribosomal protein L44e / Ribosomal protein L44 / 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a / Ribosomal protein L35Ae, conserved site / Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A / Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A / Ribosomal protein L35Ae signature. / Ribosomal_L40e / Ribosomal protein L40e / Ribosomal protein L40e superfamily / Ribosomal protein S17e, conserved site / Eukaryotic Ribosomal Protein L27, KOW domain / Ribosomal protein S17e signature. Similarity search - Domain/homology Small ribosomal subunit protein eS32 / Small ribosomal subunit protein eS24 / 60S ribosomal protein L36a-like / Large ribosomal subunit protein uL30 / 60S ribosomal protein L32 / Large ribosomal subunit protein uL16 / Small ribosomal subunit protein uS4 / Large ribosomal subunit protein eL24 / Large ribosomal subunit protein uL23 / Large ribosomal subunit protein eL33 ...Small ribosomal subunit protein eS32 / Small ribosomal subunit protein eS24 / 60S ribosomal protein L36a-like / Large ribosomal subunit protein uL30 / 60S ribosomal protein L32 / Large ribosomal subunit protein uL16 / Small ribosomal subunit protein uS4 / Large ribosomal subunit protein eL24 / Large ribosomal subunit protein uL23 / Large ribosomal subunit protein eL33 / Small ribosomal subunit protein eS12 / ATP-binding cassette sub-family E member 1 / Large ribosomal subunit protein eL29 / Small ribosomal subunit protein uS9 / Large ribosomal subunit protein eL31 / Large ribosomal subunit protein eL21 / Large ribosomal subunit protein uL29 / Small ribosomal subunit protein uS10 / Small ribosomal subunit protein RACK1 / Ubiquitin-ribosomal protein eS31 fusion protein / Large ribosomal subunit protein eL6 / Large ribosomal subunit protein uL11 / Large ribosomal subunit protein uL15 / Small ribosomal subunit protein uS15 / Large ribosomal subunit protein uL10 / Large ribosomal subunit protein uL24 / Small ribosomal subunit protein eS1 / Large ribosomal subunit protein eL8 / Small ribosomal subunit protein eS7 / Large ribosomal subunit protein uL4 / Large ribosomal subunit protein uL6 / Large ribosomal subunit protein eL43 / Large ribosomal subunit protein eL14 / Small ribosomal subunit protein uS12 / Large ribosomal subunit protein eL15 / Small ribosomal subunit protein uS11 / Large ribosomal subunit protein uL14 / Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein / Small ribosomal subunit protein eS25 / Large ribosomal subunit protein eL30 / Small ribosomal subunit protein uS7 / Small ribosomal subunit protein uS8 / Small ribosomal subunit protein eS28 / Large ribosomal subunit protein uL3 / Small ribosomal subunit protein uS2 / Small ribosomal subunit protein eS6 / Small ribosomal subunit protein eS21 / Small ribosomal subunit protein eS19 / Small ribosomal subunit protein uS3 / Small ribosomal subunit protein uS13 / Small ribosomal subunit protein eS10 / Small ribosomal subunit protein uS17 / Large ribosomal subunit protein uL2 / Large ribosomal subunit protein eL39 / Large ribosomal subunit protein eL36 / Large ribosomal subunit protein eL20 / Small ribosomal subunit protein eS17 / Large ribosomal subunit protein uL5 / Large ribosomal subunit protein uL13 / Large ribosomal subunit protein eL27 / Large ribosomal subunit protein eL34 / Small ribosomal subunit protein eS27 / Small ribosomal subunit protein uS19 / Large ribosomal subunit protein eL28 / Small ribosomal subunit protein uS14 / Ubiquitin-ribosomal protein eL40 fusion protein / Large ribosomal subunit protein uL18 / Eukaryotic peptide chain release factor subunit 1 / Large ribosomal subunit protein eL37 Similarity search - Component | |||||||||||||||
| Biological species | ![]() | |||||||||||||||
| Method | single particle reconstruction / cryo EM / Resolution: 2.86 Å | |||||||||||||||
Authors | Maldosevic E / Jomaa A | |||||||||||||||
| Funding support | United States, 2 items
| |||||||||||||||
Citation | Journal: To Be PublishedTitle: Mechanism of Ribosome Stalling by the AMD1 C-terminal Tail Arrest Peptide Authors: Maldosevic E / Boiocchi FS / Swirski MI / Meiklejohn KA / Yordanova MM / Baranov PV / Jomaa A | |||||||||||||||
| History |
|
-
Structure visualization
| Supplemental images |
|---|
-
Downloads & links
-EMDB archive
| Map data | emd_72314.map.gz | 359.8 MB | EMDB map data format | |
|---|---|---|---|---|
| Header (meta data) | emd-72314-v30.xml emd-72314.xml | 111.7 KB 111.7 KB | Display Display | EMDB header |
| Images | emd_72314.png | 83.6 KB | ||
| Masks | emd_72314_msk_1.map | 381.1 MB | Mask map | |
| Filedesc metadata | emd-72314.cif.gz | 22.8 KB | ||
| Others | emd_72314_half_map_1.map.gz emd_72314_half_map_2.map.gz | 354.1 MB 354.1 MB | ||
| Archive directory | http://ftp.pdbj.org/pub/emdb/structures/EMD-72314 ftp://ftp.pdbj.org/pub/emdb/structures/EMD-72314 | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 9q7qMC M: atomic model generated by this map C: citing same article ( |
|---|---|
| Similar structure data |
-
Links
| EMDB pages | EMDB (EBI/PDBe) / EMDataResource |
|---|---|
| Related items in Molecule of the Month |
-
Map
| File | Download / File: emd_72314.map.gz / Format: CCP4 / Size: 381.1 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Projections & slices | Image control
Images are generated by Spider. | ||||||||||||||||||||||||||||||||||||
| Voxel size | X=Y=Z: 0.83 Å | ||||||||||||||||||||||||||||||||||||
| Density |
| ||||||||||||||||||||||||||||||||||||
| Symmetry | Space group: 1 | ||||||||||||||||||||||||||||||||||||
| Details | EMDB XML:
|
-Supplemental data
-Mask #1
| File | emd_72314_msk_1.map | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Projections & Slices |
| ||||||||||||
| Density Histograms |
-Half map: #2
| File | emd_72314_half_map_1.map | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Projections & Slices |
| ||||||||||||
| Density Histograms |
-Half map: #1
| File | emd_72314_half_map_2.map | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Projections & Slices |
| ||||||||||||
| Density Histograms |
-
Sample components
+Entire : ABCE1-eRF1-RNC-AMD1C
| Entire | Name: ABCE1-eRF1-RNC-AMD1C |
|---|---|
| Components |
|
+Supramolecule #1: ABCE1-eRF1-RNC-AMD1C
| Supramolecule | Name: ABCE1-eRF1-RNC-AMD1C / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1, #4-#86, #2-#3 |
|---|---|
| Source (natural) | Organism: ![]() |
+Macromolecule #1: Ribosomal protein S27a
| Macromolecule | Name: Ribosomal protein S27a / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 18.004041 KDa |
| Sequence | String: MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGAKKR KKKSYTTPK KNKHKRKKVK LAVLKYYKVD ENGKISRLRR ECPSDECGAG VFMASHFDRH YCGKCCLTYC FNKPEDK UniProtKB: Ubiquitin-ribosomal protein eS31 fusion protein |
+Macromolecule #2: AMD1 C-tail
| Macromolecule | Name: AMD1 C-tail / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 3.359989 KDa |
| Sequence | String: (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)SVIFLQVS SKIPHRQGFR PH |
+Macromolecule #6: RACK1
| Macromolecule | Name: RACK1 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 35.115652 KDa |
| Sequence | String: MTEQMTLRGT LKGHNGWVTQ IATTPQFPDM ILSASRDKTI IMWKLTRDET NYGIPQRALR GHSHFVSDVV ISSDGQFALS GSWDGTLRL WDLTTGTTTR RFVGHTKDVL SVAFSSDNRQ IVSGSRDKTI KLWNTLGVCK YTVQDESHSE WVSCVRFSPN S SNPIIVSC ...String: MTEQMTLRGT LKGHNGWVTQ IATTPQFPDM ILSASRDKTI IMWKLTRDET NYGIPQRALR GHSHFVSDVV ISSDGQFALS GSWDGTLRL WDLTTGTTTR RFVGHTKDVL SVAFSSDNRQ IVSGSRDKTI KLWNTLGVCK YTVQDESHSE WVSCVRFSPN S SNPIIVSC GWDKLVKVWN LANCKLKTNH IGHTGYLNTV TVSPDGSLCA SGGKDGQAML WDLNEGKHLY TLDGGDIINA LC FSPNRYW LCAATGPSIK IWDLEGKIIV DELKQEVIST SSKAEPPQCT SLAWSADGQT LFAGYTDNLV RVWQVTIGTR UniProtKB: Small ribosomal subunit protein RACK1 |
+Macromolecule #9: eS29
| Macromolecule | Name: eS29 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 6.690821 KDa |
| Sequence | String: MGHQQLYWSH PRKFGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI GFIKLD UniProtKB: Small ribosomal subunit protein uS14 |
+Macromolecule #10: Ribosomal protein L8
| Macromolecule | Name: Ribosomal protein L8 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 28.088863 KDa |
| Sequence | String: MGRVIRGQRK GAGSVFRAHV KHRKGAARLR AVDFAERHGY IKGIVKDIIH DPGRGAPLAK VVFRDPYRFK KRTELFIAAE GIHTGQFVY CGKKAQLNIG NVLPVGTMPE GTIVCCLEEK PGDRGKLARA SGNYATVISH NPETKKTRVK LPSGSKKVIS S ANRAVVGV ...String: MGRVIRGQRK GAGSVFRAHV KHRKGAARLR AVDFAERHGY IKGIVKDIIH DPGRGAPLAK VVFRDPYRFK KRTELFIAAE GIHTGQFVY CGKKAQLNIG NVLPVGTMPE GTIVCCLEEK PGDRGKLARA SGNYATVISH NPETKKTRVK LPSGSKKVIS S ANRAVVGV VAGGGRIDKP ILKAGRAYHK YKAKRNCWPR VRGVAMNPVE HPFGGGNHQH IGKPSTIRRD APAGRKVGLI AA RRTGRLR GTKTVQEKEN UniProtKB: Large ribosomal subunit protein uL2 |
+Macromolecule #11: Ribosomal protein L3
| Macromolecule | Name: Ribosomal protein L3 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 46.107977 KDa |
| Sequence | String: MSHRKFSAPR HGSLGFLPRK RSSRHRGKVK SFPKDDPSKP VHLTAFLGYK AGMTHIVREV DRPGSKVNKK EVVEAVTIVE TPPMVVVGI VGYVETPRGL RTFKTVFAEH ISDECKRRFY KNWHKSKKKA FTKYCKKWQD DAGKRQLDKD FSSMKKYCQV I RVLAHTQM ...String: MSHRKFSAPR HGSLGFLPRK RSSRHRGKVK SFPKDDPSKP VHLTAFLGYK AGMTHIVREV DRPGSKVNKK EVVEAVTIVE TPPMVVVGI VGYVETPRGL RTFKTVFAEH ISDECKRRFY KNWHKSKKKA FTKYCKKWQD DAGKRQLDKD FSSMKKYCQV I RVLAHTQM RLLPLRQKKA HLMEIQVNGG TVAEKLDWAR ERLEQQVPVS QVFGQDEMID VIGVTKGKGY KGVTSRWHTK KL PRKTHRG LRKVACIGAW HPARVAFSVA RAGQKGYHHR TEINKKIYKI GQGYLIKDGK LIKNNASTDY DLSDKSINPL GGF VHYGEV TNDFVMLKGC VVGTKKRVLT LRKSLLVQTK RRALEKIDLK FIDTTSKFGH GRFQTVEEKK AFMGPLKKDR IAKE EGA UniProtKB: Large ribosomal subunit protein uL3 |
+Macromolecule #12: 60S ribosomal protein L4
| Macromolecule | Name: 60S ribosomal protein L4 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 46.388855 KDa |
| Sequence | String: MACARPLISV YSEKGESSGK NVTLPAVFKA PIRPDIVNFV HTNLRKNNRQ PYAVSELAGH QTSAESWGTG RAVARIPRVR GGGTHRSGQ GAFGNMCRGG RMFAPTKTWR RWHRRVNTTQ KRYAICSALA ASALPALVMS KGHRIEEVPE LPLVVEDKVE G YKKTKEAV ...String: MACARPLISV YSEKGESSGK NVTLPAVFKA PIRPDIVNFV HTNLRKNNRQ PYAVSELAGH QTSAESWGTG RAVARIPRVR GGGTHRSGQ GAFGNMCRGG RMFAPTKTWR RWHRRVNTTQ KRYAICSALA ASALPALVMS KGHRIEEVPE LPLVVEDKVE G YKKTKEAV LLLKKLKAWN DIKKVYASQR MRAGKGKMRN RRRIQRRGPC VIYNEDNGIV KAFRNIPGIT LLNVTKLNIL KL APGGHVG RFCIWTESAF RKLDDLYGTW RKAASLKSNY NLPMHKMLNT DLSRILKSPE IQRALRAPRK KIHRRVLKKN PLK NLRIML KLNPYAKTMR RNTILRQARN HKLRVERAAA ALAAKSDPKE APAKKKPVVG KKKKPVVGRK AAAAKKPAAD KKAA DKRAG PEDKKPAA UniProtKB: Large ribosomal subunit protein uL4 |
+Macromolecule #13: Large ribosomal subunit protein uL18
| Macromolecule | Name: Large ribosomal subunit protein uL18 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 34.481828 KDa |
| Sequence | String: MGFVKVVKNK AYFKRYQVKF RRRREGKTDY YARKRLVIQD KNKYNTPKYR MIVRVTNRDI ICQIAYARIE GDMIVCAAYA HELPKYGVK VGLTNYAAAY CTGLLLARRL LNRFGMDKIY EGQVEVTGDE YNVESIDGQP GAFTCYLDAG LARTTTGNKV F GALKGAVD ...String: MGFVKVVKNK AYFKRYQVKF RRRREGKTDY YARKRLVIQD KNKYNTPKYR MIVRVTNRDI ICQIAYARIE GDMIVCAAYA HELPKYGVK VGLTNYAAAY CTGLLLARRL LNRFGMDKIY EGQVEVTGDE YNVESIDGQP GAFTCYLDAG LARTTTGNKV F GALKGAVD GGLSIPHSTK RFPGYDSESK EFNAEVHRKH IMGQNVADYM RYLMEEDEDA YKKQFSQYIK NNVTPDMMEE MY KKAHAAI RENPVYEKKP KREVKKKRWN RPKMSLAQKK DRVAQKKASF LRAQERAAES UniProtKB: Large ribosomal subunit protein uL18 |
+Macromolecule #14: 60S ribosomal protein L6
| Macromolecule | Name: 60S ribosomal protein L6 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 33.028336 KDa |
| Sequence | String: MAGEKAPAAK PDATKKSPAK KADHARGKAK KKTLAEKKPK KGKPHCSRNP VLVRGIGRYS RSAMYSRKAL YKRKYAAPKS RIERKKKRE KVLATVTKPV GGDKNGGTRV VKLRKMPRYY PTEDVPRKLL SHGKKPFSQH VRKLRASITP GTILIILTGR H RGKRVVFL ...String: MAGEKAPAAK PDATKKSPAK KADHARGKAK KKTLAEKKPK KGKPHCSRNP VLVRGIGRYS RSAMYSRKAL YKRKYAAPKS RIERKKKRE KVLATVTKPV GGDKNGGTRV VKLRKMPRYY PTEDVPRKLL SHGKKPFSQH VRKLRASITP GTILIILTGR H RGKRVVFL KQLSSGLLLV TGPLSLNRVP LRRTHQKFVI ATSTKIDISG VKIPKHLTDA YFKKKKLRKP RHQEGEIFDT EK EKYEITE QRKVDQKAVD SQILPKIKAV PQLQGYLRSV FALTNGVYPH KLVF UniProtKB: Large ribosomal subunit protein eL6 |
+Macromolecule #15: Large ribosomal subunit protein uL30
| Macromolecule | Name: Large ribosomal subunit protein uL30 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 29.51425 KDa |
| Sequence | String: LFANNIREKK KVPAVPETLK KKRRNFAELK IKRLRKKFAQ KMLRKARRKL IYEKAKHYHK EYRQMYRTEI RMARMARKAG NFYVPAEPK LAFVIRIRGI NGVSPKVRKV LQLLRLRQIF NGTFVKLNKA SINMLRIVEP YIAWGYPNLK SVNELIYKRG Y GKINKKRI ...String: LFANNIREKK KVPAVPETLK KKRRNFAELK IKRLRKKFAQ KMLRKARRKL IYEKAKHYHK EYRQMYRTEI RMARMARKAG NFYVPAEPK LAFVIRIRGI NGVSPKVRKV LQLLRLRQIF NGTFVKLNKA SINMLRIVEP YIAWGYPNLK SVNELIYKRG Y GKINKKRI ALTDNTLIAR SLGKYNIICM EDLIHEIYTV GKHFKEANNF LWPFKLSSPR GGMKKKTTHF VEGGDAGNRE DQ INRLIRR MN UniProtKB: Large ribosomal subunit protein uL30 |
+Macromolecule #16: 60S ribosomal protein L7a
| Macromolecule | Name: 60S ribosomal protein L7a / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 36.267605 KDa |
| Sequence | String: MSSYRLGYCM KEERHNLVLC LWSQSPGILN SKCLWPFTNI HLLVGALPRE GAGGAWGGGR SEQLPTCSTT HHDFTWDKKV VNPLFEKRP KNFGIGQDIQ PKRDLTRFVK WPRYIRLQRQ RAILYKRLKV PPAINQFTQV LDRQTATQLL KLAHKYRPET K QEKKQRLL ...String: MSSYRLGYCM KEERHNLVLC LWSQSPGILN SKCLWPFTNI HLLVGALPRE GAGGAWGGGR SEQLPTCSTT HHDFTWDKKV VNPLFEKRP KNFGIGQDIQ PKRDLTRFVK WPRYIRLQRQ RAILYKRLKV PPAINQFTQV LDRQTATQLL KLAHKYRPET K QEKKQRLL ARAEKKAAGK GDVPTKRPPV LRAGVNTVTT LVENKKAQLV VIAHDVDPIE LVVFLPALCR KMGVPYCILK GK ARLCRLV HRKTCTTVAF TQVNSEDKGA LAKLVEAIRT NYNDRYDEIR RHWGGNVLGP KSVARIAKLE KAKAKELATK LG UniProtKB: Large ribosomal subunit protein eL8 |
+Macromolecule #17: 60S ribosomal protein L9
| Macromolecule | Name: 60S ribosomal protein L9 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 21.871418 KDa |
| Sequence | String: MKTILSNQTV DIPENVDISL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFR YKMRSVYAHF PINVVIQENG SLVEIRNFLG EKYIRRVRMR PGVACSVSQA QKDELVLEGN DIELVSNSAA L IQQATTVK ...String: MKTILSNQTV DIPENVDISL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFR YKMRSVYAHF PINVVIQENG SLVEIRNFLG EKYIRRVRMR PGVACSVSQA QKDELVLEGN DIELVSNSAA L IQQATTVK NKDIRKFLDG IYVSEKGTVQ QADE UniProtKB: Large ribosomal subunit protein uL6 |
+Macromolecule #18: 60S ribosomal protein L10
| Macromolecule | Name: 60S ribosomal protein L10 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 24.643057 KDa |
| Sequence | String: MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIFDLGRKK AKVDEFPLCG HMVSDEYEQL SSEALEAARI CANKYMVKSC GKDGFHIRV RLHPFHVIRI NKMLSCAGAD RLQTGMRGAF GKPQGTVARV HIGQVIMSIR TKLQNKEHVV EALRRAKFKF P GRQKIHIS ...String: MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIFDLGRKK AKVDEFPLCG HMVSDEYEQL SSEALEAARI CANKYMVKSC GKDGFHIRV RLHPFHVIRI NKMLSCAGAD RLQTGMRGAF GKPQGTVARV HIGQVIMSIR TKLQNKEHVV EALRRAKFKF P GRQKIHIS KKWGFTKFNA DEFEDMVAEK RLIPDGCGVK YIPNRGPLDK WRALHS UniProtKB: Large ribosomal subunit protein uL16 |
+Macromolecule #19: Ribosomal protein L11
| Macromolecule | Name: Ribosomal protein L11 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 20.288465 KDa |
| Sequence | String: MAQDQGEKEN PMRELRIRKL CLNICVGESG DRLTRAAKVL EQLTGQTPVF SKARYTVRSF GIRRNEKIAV HCTVRGAKAE EILEKGLKV REYELRKNNF SDTGNFGFGI QEHIDLGIKY DPSIGIYGLD FYVVLGRPGF SIADKKRRTG CIGAKHRISK E EAMRWFQQ KYDGIILPGK UniProtKB: Large ribosomal subunit protein uL5 |
+Macromolecule #21: Large ribosomal subunit protein eL13
| Macromolecule | Name: Large ribosomal subunit protein eL13 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 24.331723 KDa |
| Sequence | String: MAPSRNGMIL KPHFHKDWQR RVATWFNQPA RKIRRRKARQ ARARRIAPRP AAGPIRPIVR CPTVRYHTKV RAGRGFSLEE LRVAGIHKK VARTIGISVD PRRRNKSTES LQANVQRLKE YRSKLVLFPR KPSAPKKGDS SAEELKLATQ LTGPVMPIRN V FKKEKARV ...String: MAPSRNGMIL KPHFHKDWQR RVATWFNQPA RKIRRRKARQ ARARRIAPRP AAGPIRPIVR CPTVRYHTKV RAGRGFSLEE LRVAGIHKK VARTIGISVD PRRRNKSTES LQANVQRLKE YRSKLVLFPR KPSAPKKGDS SAEELKLATQ LTGPVMPIRN V FKKEKARV ITEEEKNFKA FASLRMARAN ARLFGIRAKR AKEAAEQDVE KKK |
+Macromolecule #22: Large ribosomal subunit protein eL14
| Macromolecule | Name: Large ribosomal subunit protein eL14 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 16.348553 KDa |
| Sequence | String: MVFRRFVEVG RVAYVSFGPH AGKLVAIVDV IDQNRALVDG PCTRVRRQAM PFKCMQLTDF ILKFPHSARQ KYVRKAWEKA DINTKWAAT RWAKKIEARE RKAKMTDFDR YKVMKAKKMR NRIIKNEVKK LQRAALLKAS UniProtKB: Large ribosomal subunit protein eL14 |
+Macromolecule #23: 60S ribosomal protein L15
| Macromolecule | Name: 60S ribosomal protein L15 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 24.076088 KDa |
| Sequence | String: GAYKYIQELW RKKQSDVMRF LLRVRCWQYR QLSALHRAPR PTRPDKARRL GYKAKQGYVI YRIRVRRGGR KRPVPKGATY GKPVHHGVN QLKFARSLQS VAEERAGRHC GALRVLNSYW VGEDSTYKFF EVILIDPFHK AIRRNPDTQW ITKPVHKHRE M RGLTSAGR ...String: GAYKYIQELW RKKQSDVMRF LLRVRCWQYR QLSALHRAPR PTRPDKARRL GYKAKQGYVI YRIRVRRGGR KRPVPKGATY GKPVHHGVN QLKFARSLQS VAEERAGRHC GALRVLNSYW VGEDSTYKFF EVILIDPFHK AIRRNPDTQW ITKPVHKHRE M RGLTSAGR KSRGLGKGHK FHHTIGGSRR AAWRRRNTLQ LHRYR UniProtKB: Large ribosomal subunit protein eL15 |
+Macromolecule #24: Large ribosomal subunit protein uL13
| Macromolecule | Name: Large ribosomal subunit protein uL13 / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 23.533299 KDa |
| Sequence | String: MAEGQVLVLD GRGHLLGRLA AIVAKQVLLG RKVVVVRCEG INISGNFYRN KLKYLAFLRK RMNTNPSRGP YHFRAPSRIF WRTVRGMLP HKTKRGQAAL DRLKVFDGIP PPYDKKKRMV VPAALKVVRL KPTRKFAYLG RLAHEVGWKY QAVTATLEEK R KEKAKIHY ...String: MAEGQVLVLD GRGHLLGRLA AIVAKQVLLG RKVVVVRCEG INISGNFYRN KLKYLAFLRK RMNTNPSRGP YHFRAPSRIF WRTVRGMLP HKTKRGQAAL DRLKVFDGIP PPYDKKKRMV VPAALKVVRL KPTRKFAYLG RLAHEVGWKY QAVTATLEEK R KEKAKIHY RKKKQLMRLR KQAEKNVEKK ISKFTDVLKT HGLLV UniProtKB: Large ribosomal subunit protein uL13 |
+Macromolecule #25: Large ribosomal subunit protein uL22
| Macromolecule | Name: Large ribosomal subunit protein uL22 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 21.34509 KDa |
| Sequence | String: MVRYSLDPEN PTKSCKSRGS NLRVHFKNTR ETAQAIKGMH IRKATKYLKD VTLKKQCVPF RRYNGGVGRC AQAKQWGWTQ GRWPKKSAE FLLHMLKNAE SNAELKGLDV DSLVIEHIQV NKAPKMRRRT YRAHGRINPY MSSPCHIEMI LTEKEQIPKP E EEVAQKKK ISQKKLKKQK LMARE |
+Macromolecule #26: Large ribosomal subunit protein eL18
| Macromolecule | Name: Large ribosomal subunit protein eL18 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 21.568492 KDa |
| Sequence | String: GVDIRHNKDR KVRRKEPKSQ DIYLRLLVKL YRFLARRTNS TFNQVVLKRL FMSRTNRPPL SLSRMIRKMK LPGRENKTAV VVGTVTDDV RVQEVPKLKV CALRVTSRAR SRILKAGGKI LTFDQLALDS PKGRGTVLLS GPRKGREVYR HFGKAPGTPH S HTKPYVRS KGRKFERARG RRASRGYKN |
+Macromolecule #27: Large ribosomal subunit protein eL19
| Macromolecule | Name: Large ribosomal subunit protein eL19 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 21.74423 KDa |
| Sequence | String: MSMLRLQKRL ASSVLRCGKK KVWLDPNETN EIANANSRQQ IRKLIKDGLI IRKPVTVHSR ARCRKNTLAR RKGRHMGIGK RKGTANARM PEKVTWMRRM RILRRLLRRY RESKKIDRHM YHSLYLKVKG NVFKNKRILM EHIHKLKADK ARKKLLADQA E ARRSKTKE ARKRREERLQ AKK |
+Macromolecule #28: Large ribosomal subunit protein eL20
| Macromolecule | Name: Large ribosomal subunit protein eL20 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 20.749391 KDa |
| Sequence | String: MKASGTLREY KVVGRCLPTP KSPAPPLYRM RIFAPNHVVA KSRFWYFVSQ LKKMKKSSGE IVYCGQVFEK SPLRVKNFGI WLRYDSRSG THNMYREYRD LTTAGAVTQC YRDMGARHRA RAHSIQVMKV EEMAAARCRR PAVKQFHDSR IRFPLPHRVL R RQHKPRFS AKRPNTFF UniProtKB: Large ribosomal subunit protein eL20 |
+Macromolecule #29: eL21
| Macromolecule | Name: eL21 / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 18.609988 KDa |
| Sequence | String: MTNTKGKRRG TRYMFSRPFR KHGVVPLATY MRIYKKGDIV DIKGMGTVQK GMPHKCYHGK TGRVYNVTQH AVGIVVNKQV KGKILAKRI NVRIEHIKHS KSRDSFLKRV KENDQKKKEA KEKGTWVQLK RQPAPPREAH FVRTNGKEPE LLEPIPYEFM A UniProtKB: Large ribosomal subunit protein eL21 |
+Macromolecule #30: Large ribosomal subunit protein eL22
| Macromolecule | Name: Large ribosomal subunit protein eL22 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 11.453195 KDa |
| Sequence | String: QVLKFTLDCT HPVEDGIMDA ANFEQFLQER IKVNGKAGNL GGGAVTIERS KSKITVTSEV PFSKRYLKYL TKKYLKKNNL RDWLRVVAN SKESYELRYF |
+Macromolecule #31: Ribosomal protein L23
| Macromolecule | Name: Ribosomal protein L23 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.892505 KDa |
| Sequence | String: MSKRGRGGSS GAKFRISLGL PVGAVINCAD NTGAKNLYII SVKGIKGRLN RLPAAGVGDM VMATVKKGKP ELRKKVHPAV VIRQRKSYR RKDGVFLYFE DNAGVIVNNK GEMKGSAITG PVAKECADLW PRIASNAGSI A UniProtKB: Large ribosomal subunit protein uL14 |
+Macromolecule #32: eL24
| Macromolecule | Name: eL24 / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.825111 KDa |
| Sequence | String: MKVELCSFSG YKIYPGHGRR YARTDGKVFQ FLNAKCESAF LSKRNPRQIN WTVLYRRKHK KGQSEEIQKK RTRRAVKFQR AITGASLAD IMAKRNQKPE VRKAQREQAI RAAKEAKKAK QASKKTAMAA AKAPTKAAPK QKIVKPVKVS APRVGGKR UniProtKB: Large ribosomal subunit protein eL24 |
+Macromolecule #33: eL23
| Macromolecule | Name: eL23 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.768246 KDa |
| Sequence | String: MAPKAKKEAP APPKVEAKAK ALKAKKAVLK GVHSHKKKKI RTSPTFRRPK TLRLRRQPKY PRKSAPRRNK LDHYAIIKFP LTTESAMKK IEDNNTLVFI VDVKANKHQI KQAVKKLYDI DVAKVNTLIR PDGEKKAYVR LAPDYDALDV ANKIGII UniProtKB: Large ribosomal subunit protein uL23 |
+Macromolecule #34: uL24
| Macromolecule | Name: uL24 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.303363 KDa |
| Sequence | String: MKFNPFVTSD RSKNRKRHFN APSHIRRKIM SSPLSKELRQ KYNVRSMPIR KDDEVQVVRG HYKGQQIGKV VQVYRKKYVI YIERVQREK ANGTTVHVGI HPSKVVITRL KLDKDRKKIL ERKAKSRQVG KEKGKYKEET IEKMQE UniProtKB: Large ribosomal subunit protein uL24 |
+Macromolecule #35: 60S ribosomal protein L27
| Macromolecule | Name: 60S ribosomal protein L27 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 15.835831 KDa |
| Sequence | String: MGKFMKPGKV VLVLAGRYSG RKAVIVKNID DGTSDRPYSH ALVAGIDRYP RKVTAAMGKK KIAKRSKIKS FVKVYNYNHL MPTRYSVDI PLDKTVVNKD VFRDPALKRK ARREAKVKFE ERYKTGKNKW FFQKLRF UniProtKB: Large ribosomal subunit protein eL27 |
+Macromolecule #36: 60S ribosomal protein L27a
| Macromolecule | Name: 60S ribosomal protein L27a / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 16.620561 KDa |
| Sequence | String: MPSRLRKTRK LRGHVSHGHG RIGKHRKHPG GRGNAGGMHH HRINFDKYHP GYFGKVGMRH YHLKRNQSFC PTVNLDKLWT LVSEQTRVN AAKNKTGAAP IIDVVRSGYY KVLGKGKLPK QPVIVKAKFF SRRAEEKIKG VGGACVLVA UniProtKB: Large ribosomal subunit protein uL15 |
+Macromolecule #37: Large ribosomal subunit protein eL29
| Macromolecule | Name: Large ribosomal subunit protein eL29 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 26.708707 KDa |
| Sequence | String: MAKSKNHTTH NQSRKWHRNG IKKPRSQRYE SLKGVDPKFL RNMRFAKKHN KKGLKKMQAN NAKAMAARAE AIKALVKPKE VKPTIPKGV SRKLHRLAYI AHPKLGRRAR ARIARGLRLS RPQTKAKAKT EPQIKGKVKA QIKAQAQAQI KSKGKGKAQA E TKPKAQAE ...String: MAKSKNHTTH NQSRKWHRNG IKKPRSQRYE SLKGVDPKFL RNMRFAKKHN KKGLKKMQAN NAKAMAARAE AIKALVKPKE VKPTIPKGV SRKLHRLAYI AHPKLGRRAR ARIARGLRLS RPQTKAKAKT EPQIKGKVKA QIKAQAQAQI KSKGKGKAQA E TKPKAQAE TKPKAQAQAK PKAQAQGKPK AQAQGKPKAQ AQAKPKAQAQ AKPKAQAQTK PKAQATPAAP VPAQAPPKGA QP PAKAP UniProtKB: Large ribosomal subunit protein eL29 |
+Macromolecule #38: eL30
| Macromolecule | Name: eL30 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 12.807065 KDa |
| Sequence | String: MVAAKKTKKS LESINSRLQL VMKSGKYVLG YKQSLKMIRQ GKAKLVILAN NCPALRKSEI EYYAMLAKTG VHHYSGNNIE LGTACGKYY RVCTLSIIDP GDSDIIRSMP EQTGEK UniProtKB: Large ribosomal subunit protein eL30 |
+Macromolecule #39: eL31
| Macromolecule | Name: eL31 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.494938 KDa |
| Sequence | String: MAPAKKGGEK KKGRSAINEV VTREYTINIH KRIHGVGFKK RAPRALKEIR KFAMKEMGTP DVRIDTRLNK AVWAKGIRNV PYRIRVRLS RKRNEDEDSP NKLYTLVTYV PVTTFKNLQT VNVDEN UniProtKB: Large ribosomal subunit protein eL31 |
+Macromolecule #40: 60S ribosomal protein L32
| Macromolecule | Name: 60S ribosomal protein L32 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 15.266293 KDa |
| Sequence | String: AALRPLVKPK IVKKRTKKFI RHQSDRYVKI KRNWRKPRGI DNRVRRRFKG QILMPNIGYG SNKKTKHMLP SGFRKFLVHN VKELEVLLM CNKSYCAEIA HNVSSKNRKA IVERAAQLAI RVTNPNARLR S UniProtKB: 60S ribosomal protein L32 |
+Macromolecule #41: eL33
| Macromolecule | Name: eL33 / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 12.580809 KDa |
| Sequence | String: MSGRLWCKAI FAGYKRGLRN QREHTALLKI EGVYARDETE FYLGKRCAYV YKAKNNTVTP GGKPNKTRVI WGKVTRAHGN SGMVRAKFR SNLPAKAIGH RIRVMLYPSR I UniProtKB: Large ribosomal subunit protein eL33 |
+Macromolecule #42: 60S ribosomal protein L34
| Macromolecule | Name: 60S ribosomal protein L34 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 13.326074 KDa |
| Sequence | String: MVQRLTYRRR LSYNTASNKT RLSRTPGNRI VYLYTKKVGK APKSACGVCP GRLRGVRAVR PKVLMRLSKT KKHVSRAYGG SMCAKCVRD RIKRAFLIEE QKIVVKVLKA QAQSQKAK UniProtKB: Large ribosomal subunit protein eL34 |
+Macromolecule #43: eL35
| Macromolecule | Name: eL35 / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.566599 KDa |
| Sequence | String: MAKIKARDLR GKKKEELLKQ LDDLKVELSQ LRVAKVTGGA ASKLSKIRVV RKSIARVLTV INQTQKENLR KFYKGKKYKP LDLRPKKTR AMRRRLNKHE ESLKTKKQQR KERLYPLRKY AVKA UniProtKB: Large ribosomal subunit protein uL29 |
+Macromolecule #44: Large ribosomal subunit protein eL36
| Macromolecule | Name: Large ribosomal subunit protein eL36 / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 12.363977 KDa |
| Sequence | String: MALRYPMAVG LNKGHKVTKN VSKPRHSRRR RRLTKHTKFV RDMIREVCGF APYERRAMEL LKVSKDKRAL KFIKKRVGTH IRAKRKREE LSSVLAAMRK AAAKKD UniProtKB: Large ribosomal subunit protein eL36 |
+Macromolecule #45: Ribosomal protein L37
| Macromolecule | Name: Ribosomal protein L37 / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 11.111032 KDa |
| Sequence | String: MTKGTSSFGK RRNKTHTLCR RCGSKAYHLQ KSTCGKCGYP AKRKRKYNWS AKAKRRNTTG TGRMRHLKIV YRRFRHGFRE GTTPKPKRA AVAASSSS UniProtKB: Large ribosomal subunit protein eL37 |
+Macromolecule #46: Large ribosomal subunit protein eL38
| Macromolecule | Name: Large ribosomal subunit protein eL38 / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 8.107752 KDa |
| Sequence | String: PRKIEEIKDF LLTARRKDAK SVKIKKNKDN VKFKVRCSRY LYTLVITDKE KAEKLKQSLP PGLAVKELK |
+Macromolecule #47: eL39
| Macromolecule | Name: eL39 / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 6.455775 KDa |
| Sequence | String: MSSHKTFRIK RFLAKKQKQN RPIPQWIWMK TGNKIRYNSK RRHWRRTKLG L UniProtKB: Large ribosomal subunit protein eL39 |
+Macromolecule #48: Ubiquitin-ribosomal protein eL40 fusion protein
| Macromolecule | Name: Ubiquitin-ribosomal protein eL40 fusion protein / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.758394 KDa |
| Sequence | String: MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGIIEP SLRQLAQKY NCDKMICRKC YARLHPRAVN CRKKKCGHTN NLRPKKKVK UniProtKB: Ubiquitin-ribosomal protein eL40 fusion protein |
+Macromolecule #49: eL41
| Macromolecule | Name: eL41 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 3.473451 KDa |
| Sequence | String: MRAKWRKKRM RRLKRKRRKM RQRSK UniProtKB: Small ribosomal subunit protein eS32 |
+Macromolecule #50: Large ribosomal subunit protein eL42
| Macromolecule | Name: Large ribosomal subunit protein eL42 / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 12.476973 KDa |
| Sequence | String: MVNVPKTRRT FCKKCGKHQP HKVTQYKKGK DSLYAQGKRR YDRKQSGYGG QTKPIFRKKA KTTKKIVLRL ECVEPNCRSK RMLAIKRCK HFELGGDKKR KGQVIQF UniProtKB: 60S ribosomal protein L36a-like |
+Macromolecule #51: eL43
| Macromolecule | Name: eL43 / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 10.29935 KDa |
| Sequence | String: MAKRTKKVGI VGKYGTRYGA SLRKMVKKIE ISQHAKYTCS FCGKTKMKRR AVGIWHCGSC MKTVAGGAWT YNTTSAVTVK SAIRRLKEL KDQ UniProtKB: Large ribosomal subunit protein eL43 |
+Macromolecule #52: Small ribosomal subunit protein uS2
| Macromolecule | Name: Small ribosomal subunit protein uS2 / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 24.891537 KDa |
| Sequence | String: MSGALDVLQM KEEDVLKFLA AGTHLGGTNL DFQMEQYIYK RKSDGIYIIN LKRTWEKLLL AARAIVAIEN PADVSVISSR NTGQRAVLK FAAATGATPI AGRFTPGTFT NQIQAAFREP RLLVVTDPRA DHQPLTEASY VNLPTIALCN TDSPLRYVDI A IPCNNKGA ...String: MSGALDVLQM KEEDVLKFLA AGTHLGGTNL DFQMEQYIYK RKSDGIYIIN LKRTWEKLLL AARAIVAIEN PADVSVISSR NTGQRAVLK FAAATGATPI AGRFTPGTFT NQIQAAFREP RLLVVTDPRA DHQPLTEASY VNLPTIALCN TDSPLRYVDI A IPCNNKGA HSVGLMWWML AREVLRMRGT ISREHPWEVM PDLYFYRDPE EIEKEEQAAA EKAV UniProtKB: Small ribosomal subunit protein uS2 |
+Macromolecule #53: eL28
| Macromolecule | Name: eL28 / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 15.783614 KDa |
| Sequence | String: MSAHLQWMVV RNCSSFLIKR NKQTYSTEPN NLKARNSFRY NGLIHRKTVG VEPAADGKGV VVVMKRRSGQ RKPATSYVRT TINKNARAT LSSIRHMIRK NKYHPDLRMA AIRRASAILR SQKPVMVKRK RTRPTKSS UniProtKB: Large ribosomal subunit protein eL28 |
+Macromolecule #54: 60S acidic ribosomal protein P0
| Macromolecule | Name: 60S acidic ribosomal protein P0 / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 34.380504 KDa |
| Sequence | String: MPREDRATWK SNYFLKIIQL LDDYPKCFIV GADNVGSKQM QQIRMSLRGK AVVLMGKNTM MRKAIRGHLE NNPALEKLLP HIRGNVGFV FTKEDLTEIR DMLLANKVPA AARAGAIAPC EVTVPAQNTG LGPEKTSFFQ ALGITTKISR GTIEILSDVQ L IKTGDKVG ...String: MPREDRATWK SNYFLKIIQL LDDYPKCFIV GADNVGSKQM QQIRMSLRGK AVVLMGKNTM MRKAIRGHLE NNPALEKLLP HIRGNVGFV FTKEDLTEIR DMLLANKVPA AARAGAIAPC EVTVPAQNTG LGPEKTSFFQ ALGITTKISR GTIEILSDVQ L IKTGDKVG ASEATLLNML NISPFSFGLI IQQVFDNGSI YNPEVLDITE DTLHSRFLEG VRNVASVCLQ IGYPTVASVP HS IINGYKR VLALSVETEY TFPLAEKVKA FLADPSAFVA AAPVAAASTA APAAAAAAPA KVEAKEESEE SDEDMGFGLF D UniProtKB: Large ribosomal subunit protein uL10 |
+Macromolecule #55: 60S ribosomal protein L12
| Macromolecule | Name: 60S ribosomal protein L12 / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.847619 KDa |
| Sequence | String: MPPKFDPNEI KVVYLRCTGG EVGATSALAP KIGPLGLSPK KVGDDIAKAT GDWKGLRITV KLTIQNRQAQ IEVVPSASAL IIKALKEPP RDRKKQKNIK HSGNITFDEI VNIARQMRHR SLARELSGTI KEILGTAQSV GCNVDGRHPH DIIDDINSGA V ECPAS UniProtKB: Large ribosomal subunit protein uL11 |
+Macromolecule #56: 40S ribosomal protein S3a
| Macromolecule | Name: 40S ribosomal protein S3a / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 30.002061 KDa |
| Sequence | String: MAVGKNKRLT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRNIGKTLVT RTQGTKIASD GLKGRVFEVS LADLQNDEVA FRKFKLITE DVQGKNCLTN FHGMDLTRDK MCSMVKKWQT MIEAHVDVKT TDGYLLRLFC VGFTKKRNNQ IRKTSYAQHQ Q VRQIRKKM ...String: MAVGKNKRLT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRNIGKTLVT RTQGTKIASD GLKGRVFEVS LADLQNDEVA FRKFKLITE DVQGKNCLTN FHGMDLTRDK MCSMVKKWQT MIEAHVDVKT TDGYLLRLFC VGFTKKRNNQ IRKTSYAQHQ Q VRQIRKKM MEIMTREVQT NDLKEVVNKL IPDSIGKDIE KACQSIYPLH DVFVRKVKML KKPKFELGKL MELHGEGSSS GK ATGDETG AKVERADGYE PPVQESV UniProtKB: Small ribosomal subunit protein eS1 |
+Macromolecule #57: Small ribosomal subunit protein uS5
| Macromolecule | Name: Small ribosomal subunit protein uS5 / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 29.716652 KDa |
| Sequence | String: MADDAGAAGG PGGPGGPGMG GRGGFRGGFG SGIRGRGRGR GRGRGRGRGA RGGKAEDKEW LPVTKLGRLV KDMKIKSLEE IYLFSLPIK ESEIIDFFLG AALKDEVLKI MPVQKQTRAG QRTRFKAFVA IGDYNGHVGL GVKCSKEVAT AIRGAIILAK L SIVPVRRG ...String: MADDAGAAGG PGGPGGPGMG GRGGFRGGFG SGIRGRGRGR GRGRGRGRGA RGGKAEDKEW LPVTKLGRLV KDMKIKSLEE IYLFSLPIK ESEIIDFFLG AALKDEVLKI MPVQKQTRAG QRTRFKAFVA IGDYNGHVGL GVKCSKEVAT AIRGAIILAK L SIVPVRRG YWGNKIGKPH TVPCKVTGRC GSVLVRLIPA PRGTGIVSAP VPKKLLMMAG IDDCYTSARG CTATLGNFAK AT FDAISKT YSYLTPDLWK ETVFTKSPYQ EFTDHLVKTH T |
+Macromolecule #58: Ribosomal protein S3
| Macromolecule | Name: Ribosomal protein S3 / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO / EC number: DNA-(apurinic or apyrimidinic site) lyase |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 26.715344 KDa |
| Sequence | String: MAVQISKKRK FVADGIFKAE LNEFLTRELA EDGYSGVEVR VTPTRTEIII LATRTQNVLG EKGRRIRELT AVVQKRFGFP EGSVELYAE KVATRGLCAI AQAESLRYKL LGGLAVRRAC YGVLRFIMES GAKGCEVVVS GKLRGQRAKS MKFVDGLMIH S GDPVNYYV ...String: MAVQISKKRK FVADGIFKAE LNEFLTRELA EDGYSGVEVR VTPTRTEIII LATRTQNVLG EKGRRIRELT AVVQKRFGFP EGSVELYAE KVATRGLCAI AQAESLRYKL LGGLAVRRAC YGVLRFIMES GAKGCEVVVS GKLRGQRAKS MKFVDGLMIH S GDPVNYYV DTAVRHVLLR QGVLGIKVKI MLPWDPSGKI GPKKPLPDHV SIVEPKDEIL PTTPISEQKG GKPEPPAMPQ PV PTA UniProtKB: Small ribosomal subunit protein uS3 |
+Macromolecule #59: Small ribosomal subunit protein eS4
| Macromolecule | Name: Small ribosomal subunit protein eS4 / type: protein_or_peptide / ID: 59 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 29.654869 KDa |
| Sequence | String: MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIIFLRN RLKYALTGDE VKKICMQRFI KIDGKVRTDI TYPAGFMDV ISIDKTGENF RLIYDTKGRF AVHRITPEEA KYKLCKVRKI FVGTKGIPHL VTHDARTIRY PDPLIKVNDT I QIDLETGK ...String: MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIIFLRN RLKYALTGDE VKKICMQRFI KIDGKVRTDI TYPAGFMDV ISIDKTGENF RLIYDTKGRF AVHRITPEEA KYKLCKVRKI FVGTKGIPHL VTHDARTIRY PDPLIKVNDT I QIDLETGK ITDFIKFDTG NLCMVTGGAN LGRIGVITNR ERHPGSFDVV HVKDANGNSF ATRLSNIFVI GKGNKPWISL PR GKGIRLT IAEERDKRLA AKQSSG |
+Macromolecule #60: Ribosomal protein S5
| Macromolecule | Name: Ribosomal protein S5 / type: protein_or_peptide / ID: 60 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 22.913453 KDa |
| Sequence | String: MTEWETAAPA VAETPDIKLF GKWSTDDVQI NDISLQDYIA VKEKYAKYLP HSAGRYAAKR FRKAQCPIVE RLTNSMMMHG RNNGKKLMT VRIVKHAFEI IHLLTGENPL QVLVNAIINS GPREDSTRIG RAGTVRRQAV DVSPLRRVNQ AIWLLCTGAR E AAFRNIKT ...String: MTEWETAAPA VAETPDIKLF GKWSTDDVQI NDISLQDYIA VKEKYAKYLP HSAGRYAAKR FRKAQCPIVE RLTNSMMMHG RNNGKKLMT VRIVKHAFEI IHLLTGENPL QVLVNAIINS GPREDSTRIG RAGTVRRQAV DVSPLRRVNQ AIWLLCTGAR E AAFRNIKT IAECLADELI NAAKGSSNSY AIKKKDELER VAKSNR UniProtKB: Small ribosomal subunit protein uS7 |
+Macromolecule #61: 40S ribosomal protein S6
| Macromolecule | Name: 40S ribosomal protein S6 / type: protein_or_peptide / ID: 61 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 28.751906 KDa |
| Sequence | String: MKLNISFPAT GCQKLIEVDD ERKLRTFYEK RMATEVAADA LGEEWKGYVV RISGGNDKQG FPMKQGVLTH GRVRLLLSKG HSCYRPRRT GERKRKSVRG CIVDANLSVL NLVIVKKGEK DIPGLTDTTV PRRLGPKRAS RIRKLFNLSK EDDVRQYVVR K PLNKEGKK ...String: MKLNISFPAT GCQKLIEVDD ERKLRTFYEK RMATEVAADA LGEEWKGYVV RISGGNDKQG FPMKQGVLTH GRVRLLLSKG HSCYRPRRT GERKRKSVRG CIVDANLSVL NLVIVKKGEK DIPGLTDTTV PRRLGPKRAS RIRKLFNLSK EDDVRQYVVR K PLNKEGKK PRTKAPKIQR LVTPRVLQHK RRRIALKKQR TKKNKEEAAE YAKLLAKRMK EAKEKRQEQI AKRRRLSSLR AS TSKSESS QK UniProtKB: Small ribosomal subunit protein eS6 |
+Macromolecule #62: 40S ribosomal protein S30
| Macromolecule | Name: 40S ribosomal protein S30 / type: protein_or_peptide / ID: 62 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.498884 KDa |
| Sequence | String: MQLFVRAQEL HTLEVTGRET VAQIKAHVAS LEGIAPEDQV VLLAGTPLED EATLGQCGVE ALSTLEVAGR MLGGKVHGSL ARVGKVRGQ TLKVAKQEKK KKRTGRAKRR MQYNRRFVNV VPTFGKKKGP NANS UniProtKB: Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein |
+Macromolecule #63: 40S ribosomal protein S7
| Macromolecule | Name: 40S ribosomal protein S7 / type: protein_or_peptide / ID: 63 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 22.168914 KDa |
| Sequence | String: MFSSSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELNITAAKE IEVGGGRKAI IIFVPVPQLK SFQKIQVRLV RELEKKFSG KHVVFIAQRR ILPKPTRKSR TKNKQKRPRS RTLTAVHDAI LEDLVFPSEI VGKRIRVKLD GSRLIKVHLD K AQQNNVEH ...String: MFSSSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELNITAAKE IEVGGGRKAI IIFVPVPQLK SFQKIQVRLV RELEKKFSG KHVVFIAQRR ILPKPTRKSR TKNKQKRPRS RTLTAVHDAI LEDLVFPSEI VGKRIRVKLD GSRLIKVHLD K AQQNNVEH KVETFSGVYK KLTGKDVNFE FPEFQL UniProtKB: Small ribosomal subunit protein eS7 |
+Macromolecule #64: eS8
| Macromolecule | Name: eS8 / type: protein_or_peptide / ID: 64 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 24.263387 KDa |
| Sequence | String: MGISRDNWHK RRKTGGKRKP YHKKRKYELG RPAANTKIGP RRIHTVRVRG GNKKYRALRL DVGNFSWGSE CCTRKTRIID VVYNASNNE LVRTKTLVKN CIVLIDSTPY RQWYESHYAL PLGRKKGAKL TPEEEEILNK KRSKKIQKKY DERKKNAKIS S LLEEQFQQ ...String: MGISRDNWHK RRKTGGKRKP YHKKRKYELG RPAANTKIGP RRIHTVRVRG GNKKYRALRL DVGNFSWGSE CCTRKTRIID VVYNASNNE LVRTKTLVKN CIVLIDSTPY RQWYESHYAL PLGRKKGAKL TPEEEEILNK KRSKKIQKKY DERKKNAKIS S LLEEQFQQ GKLLACIASR PGQCGRADGY VLEGKELEFY LRKIKARKGK |
+Macromolecule #65: Ribosomal protein S9 (Predicted)
| Macromolecule | Name: Ribosomal protein S9 (Predicted) / type: protein_or_peptide / ID: 65 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 22.641564 KDa |
| Sequence | String: MPVARSWVCR KTYVTPRRPF EKSRLDQELK LIGEYGLRNK REVWRVKFTL AKIRKAAREL LTLDEKDPRR LFEGNALLRR LVRIGVLDE GKMKLDYILG LKIEDFLERR LQTQVFKLGL AKSIHHARVL IRQRHIRVRK QVVNIPSFIV RLDSQKHIDF S LRSPYGGG ...String: MPVARSWVCR KTYVTPRRPF EKSRLDQELK LIGEYGLRNK REVWRVKFTL AKIRKAAREL LTLDEKDPRR LFEGNALLRR LVRIGVLDE GKMKLDYILG LKIEDFLERR LQTQVFKLGL AKSIHHARVL IRQRHIRVRK QVVNIPSFIV RLDSQKHIDF S LRSPYGGG RPGRVKRKNA KKGQGGAGAG DDEEED UniProtKB: Small ribosomal subunit protein uS4 |
+Macromolecule #66: Ribosomal protein S11
| Macromolecule | Name: Ribosomal protein S11 / type: protein_or_peptide / ID: 66 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 18.468826 KDa |
| Sequence | String: MADIQTERAY QKQPTIFQNK KRVLLGETGK EKLPRYYKNI GLGFKTPKEA IEGTYIDKKC PFTGNVSIRG RILSGVVTKM KMQRTIVIR RDYLHYIRKY NRFEKRHKNM SVHLSPCFRD VQIGDIVTVG ECRPLSKTVR FNVLKVTKAA GTKKQFQKF UniProtKB: Small ribosomal subunit protein uS17 |
+Macromolecule #67: Ribosomal protein S28
| Macromolecule | Name: Ribosomal protein S28 / type: protein_or_peptide / ID: 67 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 7.855052 KDa |
| Sequence | String: MDTSRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDTSR SIIRNVKGPV REGDVLTLLE SEREARRLR UniProtKB: Small ribosomal subunit protein eS28 |
+Macromolecule #68: uS10
| Macromolecule | Name: uS10 / type: protein_or_peptide / ID: 68 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 13.398763 KDa |
| Sequence | String: MAFKDTGKTP VEPEVAIHRI RITLTSRNVK SLEKVCADLI RGAKEKNLKV KGPVRMPTKT LRITTRKTPC GEGSKTWDRF QMRIHKRLI DLHSPSEIVK QITSISIEPG VEVEVTIADA UniProtKB: Small ribosomal subunit protein uS10 |
+Macromolecule #69: Small ribosomal subunit protein eS21
| Macromolecule | Name: Small ribosomal subunit protein eS21 / type: protein_or_peptide / ID: 69 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 9.139337 KDa |
| Sequence | String: MQNDAGEFVD LYVPRKCSAS NRIIGAKDHA SIQMNVAEVD KVTGRFNGQF KTYAICGAIR RMGESDDSIL RLAKSDGIVS QNF UniProtKB: Small ribosomal subunit protein eS21 |
+Macromolecule #70: uS13
| Macromolecule | Name: uS13 / type: protein_or_peptide / ID: 70 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.759777 KDa |
| Sequence | String: MSLVIPEKFQ HILRVLNTNI DGRRKIAFAI TAIKGVGRRY AHVVLRKADI DLTKRAGELT EDEVERVITI MQNPRQYKIP DWFLNRQKD VKDGKYSQVL ANGLDNKLRE DLERLKKIRA HRGLRHFWGL RVRGQHTKTT GRRGRTVGVS KKK UniProtKB: Small ribosomal subunit protein uS13 |
+Macromolecule #71: 40S ribosomal protein S27
| Macromolecule | Name: 40S ribosomal protein S27 / type: protein_or_peptide / ID: 71 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 9.480186 KDa |
| Sequence | String: MPLAKDLLHP SPEEEKRKHK KKRLVQSPNS YFMDVKCPGC YKITTVFSHA QTVVLCVGCS TVLCQPTGGK ARLTEGCSFR RKQH UniProtKB: Small ribosomal subunit protein eS27 |
+Macromolecule #72: Small ribosomal subunit protein eS17
| Macromolecule | Name: Small ribosomal subunit protein eS17 / type: protein_or_peptide / ID: 72 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 15.420924 KDa |
| Sequence | String: GRVRTKTVKK AARVIIEKYY TRLGNDFHTN KRVCEEIAII PSKKLRNKIA GYVTHLMKRI QRGPVRGISI KLQEEERERR DNYVPEVSA LDQEIIEVDP DTKEMLKLLD FGSLSNLQVT QPTVGMNFKT PRGAV UniProtKB: Small ribosomal subunit protein eS17 |
+Macromolecule #73: eS26
| Macromolecule | Name: eS26 / type: protein_or_peptide / ID: 73 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 13.015506 KDa |
| Sequence | String: MTKKRRNNGR AKKGRGHVQP IRCTNCARCV PKDKAIKKFV IRNIVEAAAV RDISEVSVFD AYVLPKLYVK LHYCVSCAIH SKVVRNRSR EARKDRTPPP RFRPAGAAPP PPPKPM |
+Macromolecule #74: Small ribosomal subunit protein uS11
| Macromolecule | Name: Small ribosomal subunit protein uS11 / type: protein_or_peptide / ID: 74 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 16.302772 KDa |
| Sequence | String: MAPRKGKEKK EEQVISLGPQ VAEGENVFGV CHIFASFNDT FVHVTDLSGK ETICRVTGGM KVKADRDESS PYAAMLAAQD VAQRCKELG ITALHIKLRA TGGNRTKTPG PGAQSALRAL ARSGMKIGRI EDVTPIPSDS TRRKGGRRGR RL UniProtKB: Small ribosomal subunit protein uS11 |
+Macromolecule #75: Small ribosomal subunit protein eS24
| Macromolecule | Name: Small ribosomal subunit protein eS24 / type: protein_or_peptide / ID: 75 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 15.463333 KDa |
| Sequence | String: MNDTVTIRTR KFMTNRLLQR KQMVIDVLHP GKATVPKTEI REKLAKMYKT TPDVIFVFGF RTHFGGGKTT GFGMIYDSLD YAKKNEPKH RLARHGLYEK KKTSRKQRKE RKNRMKKVRG TAKANVGAGK KPKE UniProtKB: Small ribosomal subunit protein eS24 |
+Macromolecule #76: eS25
| Macromolecule | Name: eS25 / type: protein_or_peptide / ID: 76 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 13.645028 KDa |
| Sequence | String: PPKDDKKKKD AGKSAKKDKD PVNKSGGKAK KKKWSKGKVR DKLNNLVLFD KATYDKLCKE VPNYKLITPA VVSERLKIRG SLARAALQE LLSKGLIKLV SKHRAQVIYT RNTKGGDAPA AGEDA UniProtKB: Small ribosomal subunit protein eS25 |
+Macromolecule #77: eS19
| Macromolecule | Name: eS19 / type: protein_or_peptide / ID: 77 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 16.235796 KDa |
| Sequence | String: MPGVTVKDVN QQEFVRALAA FLKKSGKLKV PEWVDTVKLA KHKELAPYDE NWFYTRAAST ARHLYLRGGA GVGSMTKIYG GRQRNGVMP SHFSRGSKSV ARRVLQALEG LKMVEKDQDW GRKLTPQGQR DLDRIAGQVA AAKKKH UniProtKB: Small ribosomal subunit protein eS19 |
+Macromolecule #78: Ribosomal protein S13
| Macromolecule | Name: Ribosomal protein S13 / type: protein_or_peptide / ID: 78 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.259389 KDa |
| Sequence | String: MGRMHAPGKG LSQSALPYRR SVPTWLKLTS DDVKEQIYKL AKKGLTPSQI GVILRDSHGV AQVRFVTGNK ILRILKSKGL APDLPEDLY HLIKKAVAVR KHLERNRKDK DAKFRLILIE SRIHRLARYY KTKRVLPPNW KYESSTASAL VA UniProtKB: Small ribosomal subunit protein uS15 |
+Macromolecule #79: Eukaryotic peptide chain release factor subunit 1
| Macromolecule | Name: Eukaryotic peptide chain release factor subunit 1 / type: protein_or_peptide / ID: 79 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 49.092742 KDa |
| Sequence | String: MADDPSAADR NVEIWKIKKL IKSLEAARGN GTSMISLIIP PKDQISRVAK MLADEFGTAS NIKSRVNRLS VLGAITSVQQ RLKLYNKVP PNGLVVYCGT IVTEEGKEKK VNIDFEPFKP INTSLYLCDN KFHTEALTAL LSDDSKFGFI VIDGSGALFG T LQGNTREV ...String: MADDPSAADR NVEIWKIKKL IKSLEAARGN GTSMISLIIP PKDQISRVAK MLADEFGTAS NIKSRVNRLS VLGAITSVQQ RLKLYNKVP PNGLVVYCGT IVTEEGKEKK VNIDFEPFKP INTSLYLCDN KFHTEALTAL LSDDSKFGFI VIDGSGALFG T LQGNTREV LHKFTVDLPK KHGRGGQSAL RFARLRMEKR HNYVRKVAET AVQLFISGDK VNVAGLVLAG SADFKTELSQ SD MFDQRLQ SKVLKLVDIS YGGENGFNQA IELSTEVLSN VKFIQEKKLI GRYFDEISQD TGKYCFGVED TLKALEMGAV EIL IVYENL DIMRYVLHCQ GTEEEKILYL TPEQEKDKSH FTDKETGQEH ELIESMPLLE WFANNYKKFG ATLEIVTDKS QEGS QFVKG FGGIGGILRY RVDFQGMEYQ GGDDEFFDLD DY UniProtKB: Eukaryotic peptide chain release factor subunit 1 |
+Macromolecule #80: 40S ribosomal protein S12
| Macromolecule | Name: 40S ribosomal protein S12 / type: protein_or_peptide / ID: 80 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.538987 KDa |
| Sequence | String: MAEEGIAAGG VMDVNTALQE VLKTALIHDG LARGIREAAK ALDKRQAHLC VLASNCDEPM YVKLVEALCA EHQINLIKVD DNKKLGEWV GLCKIDREGK PRKVVGCSCV VVKDYGKESQ AKDVIEEYFK CKK UniProtKB: Small ribosomal subunit protein eS12 |
+Macromolecule #81: S10_plectin domain-containing protein
| Macromolecule | Name: S10_plectin domain-containing protein / type: protein_or_peptide / ID: 81 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 18.933846 KDa |
| Sequence | String: MLMPKKNRIA IYELLFKEGV MVAKKDVHMP KHPELADKNV PNLHVMKAMQ SLKSRGYVKE QFAWRHFYWY LTNEGIQYLR DYLHLPPEI VPATLRRSRP ETGRPRPKGL EGERPARLTR GEADRDTYRR SAVPPGADKK AEAGAGSATE FQFRGGFGRG R GQPPQ UniProtKB: Small ribosomal subunit protein eS10 |
+Macromolecule #82: Ribosomal protein S15a
| Macromolecule | Name: Ribosomal protein S15a / type: protein_or_peptide / ID: 82 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 14.865555 KDa |
| Sequence | String: MVRMNVLADA LKSINNAEKR GKRQVLIRPC SKVIVRFLTV MMKHGYIGEF EIIDDHRAGK IVVNLTGRLN KCGVISPRFD VQLKDLEKW QNNLLPSRQF GFIVLTTSAG IMDHEEARRK HTGGKILGFF F UniProtKB: Small ribosomal subunit protein uS8 |
+Macromolecule #83: uS9
| Macromolecule | Name: uS9 / type: protein_or_peptide / ID: 83 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 16.477377 KDa |
| Sequence | String: MPSKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE MIEPRTLQYK LLEPVLLLGK ERFAGVDIRV RVKGGGHVAQ IYAIRQSIS KALVAYYQKY VDEASKKEIK DILIQYDRTL LVADPRRCES KKFGGPGARA RYQKSYR UniProtKB: Small ribosomal subunit protein uS9 |
+Macromolecule #84: uS12
| Macromolecule | Name: uS12 / type: protein_or_peptide / ID: 84 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 15.844666 KDa |
| Sequence | String: MGKCRGLRTA RKLRSHRRDQ KWHDKQYKKA HLGTALKANP FGGASHAKGI VLEKVGVEAK QPNSAIRKCV RVQLIKNGKK ITAFVPNDG CLNFIEENDE VLVAGFGRKG HAVGDIPGVR FKVVKVANVS LLALYKGKKE RPRS UniProtKB: Small ribosomal subunit protein uS12 |
+Macromolecule #85: uS19
| Macromolecule | Name: uS19 / type: protein_or_peptide / ID: 85 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 17.049182 KDa |
| Sequence | String: MAEVEQKKKR TFRKFTYRGV DLDQLLDMSY EQLMQLYSAR QRRRLSRGLR RKQHSLLKRL RKAKKEAPPM EKPEVVKTHL RDMIILPEM VGSMVGVYNG KTFNQVEIKP EMIGHYLGEF SITYKPVKHG RPGIGATHSS RFIPLK UniProtKB: Small ribosomal subunit protein uS19 |
+Macromolecule #86: ATP binding cassette subfamily E member 1
| Macromolecule | Name: ATP binding cassette subfamily E member 1 / type: protein_or_peptide / ID: 86 / Number of copies: 1 / Enantiomer: LEVO |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 67.405234 KDa |
| Sequence | String: MADKLTRIAI VNHDKCKPKK CRQECKKSCP VVRMGKLCIE VTPQSKIAWI SETLCIGCGI CIKKCPFGAL SIVNLPSNLE KETTHRYCA NAFKLHRLPI PRPGEVLGLV GTNGIGKSTA LKILAGKQKP NLGKYDDPPD WQEILTYFRG SELQNYFTKI L EDDLKAII ...String: MADKLTRIAI VNHDKCKPKK CRQECKKSCP VVRMGKLCIE VTPQSKIAWI SETLCIGCGI CIKKCPFGAL SIVNLPSNLE KETTHRYCA NAFKLHRLPI PRPGEVLGLV GTNGIGKSTA LKILAGKQKP NLGKYDDPPD WQEILTYFRG SELQNYFTKI L EDDLKAII KPQYVDQIPK AAKGTVGSIL DRKDETKTQA IVCQQLDLTH LKERNVEDLS GGELQRFACA VVCIQKADIF MF DEPSSYL DVKQRLKAAI TIRSLINPDR YIIVVEHDLS VLDYLSDFIC CLYGVPSAYG VVTMPFSVRE GINIFLDGYV PTE NLRFRD ASLVFKVAET ANEEEVKKMC MYKYPGMKKK MGEFELAIVA GEFTDSEIMV MLGENGTGKT TFIRMLAGRL KPDE GGEVP VLNVSYKPQK ISPKSTGSVR QLLHEKIRDA YTHPQFVTDV MKPLQIENII DQEVQTLSGG ELQRVALALC LGKPA DVYL IDEPSAYLDS EQRLMAARVV KRFILHAKKT AFVVEHDFIM ATYLADRVIV FDGVPSKNTV ANSPQTLLAG MNKFLS QLE ITFRRDPNNY RPRINKLNSI KDVEQKKSGN YFFLDD UniProtKB: ATP-binding cassette sub-family E member 1 |
+Macromolecule #3: tRNA
| Macromolecule | Name: tRNA / type: rna / ID: 3 / Number of copies: 1 |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 24.489477 KDa |
| Sequence | String: GGCCAUGGUG GCGUAAGGGU AACGCGUCAC ACUAUGGAUG UGAAGAUUCU AGGUUCGACU CCUGGCUGUU GCUCCA |
+Macromolecule #4: mRNA
| Macromolecule | Name: mRNA / type: rna / ID: 4 / Number of copies: 1 |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 3.444074 KDa |
| Sequence | String: CCUCAUUAGG U |
+Macromolecule #5: 28S rRNA
| Macromolecule | Name: 28S rRNA / type: rna / ID: 5 / Number of copies: 1 |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 2.3343884999999998 MDa |
| Sequence | String: UGGGAAGAGG CGCUGGGGGG GGGGCGGUGU GCCGCUGGCG GUGGUGACGG GGUGUGGGGC GUGUGCUGGU CGCGCGUCUC CCCCUCGCC GUCUCGGGCU CCGCUCCCUU GGCUCCUCUC GCCCCCUCCC CCCACUCCAU GCCGCUGCCA CCUCCCCCCG C CCCUCGUC ...String: UGGGAAGAGG CGCUGGGGGG GGGGCGGUGU GCCGCUGGCG GUGGUGACGG GGUGUGGGGC GUGUGCUGGU CGCGCGUCUC CCCCUCGCC GUCUCGGGCU CCGCUCCCUU GGCUCCUCUC GCCCCCUCCC CCCACUCCAU GCCGCUGCCA CCUCCCCCCG C CCCUCGUC UUGUCUCUCC AUCCCGGGGC CCGUCAUCCC UCUCUCCGUU GGAGGUCCCG GCCGCCCCGG AGCCACCUGG GC GCGGAGG AGGGAGGAGG AGGUUGUCCC CUCCCACGCA CGCCUCGGGG CCGUCGCCGU CCUCCCGCCU UUCCCUCUCC CCC UACCCC UUCUGCCGCA CUCCUCUCAC CCCCAACUUC GUGGCGUCCC GAGAGGGCCU CGAGGUCUGU GUGUGCUUGU CGUU GGCGA UGGGGGUUGU UGGGGGUGGA CGAGGGGGCG UGUGCCGUCG CUGCCGCGUG GCCGUGGCGG UCCGGGUUGG CCGGU GGGG UGCGUCUGGG UGGUGCGUGU GCGCCUCUUG CCCUCCUCUU CCGUCUCCGG CGUCCGUCUG AGCUCCCCGG UCCCCU GUG GCCGGGGGGC GGGCGUCGGG CGGGGGGGGG UGUCUGGAGG UGGCCUCGGU GCCACCUCCC GUGCCUCAUC CGGUUUC CC CGCCGUCGUC CUCGCGCGCG GCUUGCACCG CUUCCCCCUC CCCCCAACUU CUCCUCCCGC CUCUCCUCCA GGUACCUA G CGCGUUCCGG CGCGGAGGUU UAAAGACCCC CGGGGGUGUA CCGCCUGUCC GCCUCGGGGU CGGGGCGGCG GGCCUGUGG GGAGUCGGGC GGGUCCCGUC CCGUCCGUCC UCCCCCUGAC UCCGCUCCUC CUGCCCGGCC GAGGCGGGGG CGCUCGCUCG CGCGCCGCG CAGCCUCUCG CGGCGGCUGC CGUCGGGAAA GGGGCGCCUG ACCCGGCGGU GGUGUCGUGC CGCGAGAGGG G UGCGCGCG GGGGCGUCGC GUCCUUGUCC CGUGCCGUGU CGGGGGGGGC GGGAGCCCCC UGGGCGCCUG UGGGGUCGUC UG CGUGCUC GCGGGCGCGC CCCGCGUCGA AACCCACCGA CCCCUCCCAG AGUCUUUCAU UGUGUCCAGU CUACUGGCCU GCC CGAGGC AACCCCUUCU CUUCUGUGGG UAGGGGAUGG UGCUGUGCCA GGCUUUCCCU UGACGGGAAA GAGCCAAAAA AAAC CUCGU ACGACUCUUA GCGGUGGAUC ACUCGGCUCG UGCGUCGAUG AAGAACGCAG CUAGCUGCGA GAAUUAAUGU GAAUU GCAG GACACAUUGA UCAUCGACAC UUCGAACGCA CUUGCGGCCC CGGGUUCCUC CCGGGGCUAC GCCUGUCUGA GCGUCG CUU GACGAUCAAU CGCCCCCGGG UGGGUGCCUC GCGCCUCCCC GGGUUGCGCG GCUGGGGGUU UCUGAUCGCA GGGUCUG UA UUUUUUGCCC UCCGUCCCCC UAAGUGCAGA UGGUGGCCCA CUGGCCCCCG ACUCCACCCU CCCUCUCCUC GUCCUUUC C UCGUCUCGCG ACUGUCCCGC GCGCCACCGG CCCCUUCCCC CGUGCCGCCU CCCUCCUUCC CCGUCGCCCG CCCGCCCUC CCGUCCGGCA GGGGGCCUCC CCACGCGCCC UAGUGGCGCG GAGGUGGUUG UGCCCCCCCC CGGCGGGAGA UGGCGUUCGG GUGGCGGGG CGGGGAAGUG GAGGUGGGUG UGGGGGCGGG CAAGGCCGCC GGGGGGGCAU GGUGCGAGGG GAGUGGGGGG G GCGUGUCU GCGGGCCGUG GUGCCGGCUG CCAGCGAGAG GUGGUGAGCA CGCGCGUGUG CGUUGGGGGG ACCGAGGCCG CG GAAUCGG UAAGGGAAGC GCCCCACGCC GUCUCGGCGU GGGUCCCCCC GGCCGCGGUC CCCGUCCCUC CGUCGGGAGA GCU CGUUCG UGCUGUGCGC GGUCGCGGCG GGGGGAGAAG GGGGUGGUGG CGGCGCGGCG AGCGCCGGGA GCGGGGUGGC AGGU GGCUG UCUCCUCCCC CGCCGGUGUG CGCCAGGUGC GCCUCGGCGG GGGUCAUGGG GAGGCCCCGG GCCUCUCCGC CCCCC GCGC GUCUUGGCGC GCCGGCCCAU GCAUCCAUCC GUCCUUCGCU CCCGCGGCGC CGGGGUCGGC UCGUGCCGAG GCCGGG UCG GCGCGCGUGU GGUCGCGCCU CGGGGAUGCG UGCCCCGGCG GCGGCCCGCG GGACGCCGCG GCGUCGUCCG UCCGUCG CC CGUCUACCCU CGGGGGGUGC UCCCGCCGCU CCGCCGGCCC CGAGGAGACC CCGGCCUUGG CCGUUGGCGU GGCUCGUG U CUCCCGCUGC CCGCUCCUCU GCCUCUCCCU GCCUGCCUGC CUUCCUUCCU UCGUCCCUCC CUCCCUCCGA GACGCGACC UCAGAUCAGA CGUGGCGACC CGCUGAAUUU AAGCAUAUUA GUCAGCGGAG GAAAAGAAAC UAACCAGGAU UCCCUCAGUA ACGGCGAGU GAACAGGGAA GAGCCCAGCG CCGAAUCCCC GCCCCGCGGU GGGGCGCGGG AAAUGUGGCG UACGGAAGAC C CACUCCCC GGCGCCGCUC GUGGGGGGCC CAAGUCCUUC UGAUCGAGGC CCAGCCCGUG GACGGUGUGA GGCCGGUAGC GG CCCCCGG CGCGCCGGGC CCGGGUCUUC CCGGAGUCGG GUUGCUUGGG AAUGCAGCCC AAAGCGGGUG GUAAACUCCA UCU AAGGCU AAAUACCGGC ACGAGACCGA UAGUCAACAA GUACCGUAAG GGAAAGUUGA AAAGAACUUU GAAGAGAGAG UUCA AGAGG GCGUGAAACC GUUAAGAGGU AAACGGGUGG GGUCCGCGCA GUCCGCCCGG AGGAUUCAAC CCGGCGGCGG GGUCC GGCC GUGCCGGCGG UCUCGGCGGA UCUUUCCCGC UCCCCGUUCC UCCCGACCCC UCCACCCGCU CCCCCUCCCC CGCCGG UCU UCUCCCUUCA CGGGGGGUGG GUCGGCGGGU GCGGGGGUGG GCGGGCGGGG CCGGGGGUGG GGUCGGCGGG GGACCGC CC CCCGGCCGGC GACCGGCCGC CGCCGGGCGC AUUUCCACCG CGGCGGUGCG CCGCGACCGG CUCCGGGACG GCUGGGAA G GCCCCGGCGG GGAAGGUGGC CCGGGGGGAC GCCUCGCCGC CGUCGUCCGC GGCGGCGGCG GGCGCGACCC CUCCCCGGG UGUUACAGCC CCGCCCCGGC AGCAGCAGCU CGCCGAAUCC CGGGGCCGAG GGAGCGAGAC CUGUGUCGCC GCGCUCUCCC CCCUCCCGG CGCUCCCCCC CGCGGGGGUC CCCCGCGAGG GGGCUCCCCC CGCGGGGGCG CGCCGGUGUC GCCGCCCUCG C GGGCGCGG CACGGGGGGG CCGGGCCGCC CCUCCCACGG CGCGACCGCU CUCCCGGCCC CCGCCGCCGC CUCUUCGGGC GU GCGGCGG GGGUGGGGCG GACUGUCCCC AGUGCGCCCC GGGCGUGUCA CGCCGUCGGG CUCGGGGGAG AAGUCGGCCA CGG CGCGUC GCGCGCCUCC GCGUCCCCCC CUCGCCGUCU CCGGGCGGCG GGGGGGGGUU UCGGCGCGGU GUUCUCGGCG CGCG CGCGC GAGCGAGCGC ACGGGGUCGG CGGCGAUGUC GGCUACCCAC CCGACCCGUC UUGAAACACG GACCAAGGAG UCUAA CACG UGCGCGAGUC GGGGGCUCGC ACGAAAGCCG CCGUGGCGCA AUGAAGGUGA AGGCCGGCGG CGGCUUCCCG CCGUCG UCG GCCGAGGUGG GAUCCCGAGG CCCUUCCAGU CCGCCGAGGG CGCACCACCG GCCCGUCUCG CCCGCCGCGC CGGGGAG GU GGAGCACGAG CGCACGUGUU AGGACCCGAA AGAUGGUGAA CUAUGCCUGG GCAGGGCGAA GCCAGAGGAA ACUCUGGU G GAGGUCCGUA GCGGUCCUGA CGUGCAAAUC GGUCGUCCGA CCUGGGUAUA GGGGCGAAAG ACUAAUCGAA CCAUCUAGU AGCUGGUUCC CUCCGAAGUU UCCCUCAGGA UAGCUGGCGC UCUCGCAACC CCGCAGUUUU AUCCGGUAAA GCGAAUGAUU AGAGGUCUU GGGGCCGAAA CGAUCUCAAC CUAUUCUCAA ACUUUAAAUG GGUAAGAAGC CCGGCUCGCU GGCGUGGAGC C GGGCGUGG AAUGCGAGUG CCUAGUGGGC CACUUUUGGU AAGCAGAACU GGCGCUGCGG GAUGAACCGA ACGCCGGGUU AA GGCGCCC GAUGCCGACG CUCAUCAGAC CCCAGAAAAG GUGUUGGUUG AUAUAGACAG CAGGACGGUG GCCAUGGAAG UCG GAAUCC GCUAAGGAGU GUGUAACAAC UCACCUGCCG AAUCAACUAG CCCUGAAAAU GGAUGGCGCU GGAGCGUCGG GCCC AUACC CGGCCGUCGC UGGCAGUCGG CAGAGCGAGA AAGAGAGUGG AGCGCGCCGC GGGACUCCCC CCGCGGGGGU CCCCG GCCA CCCCCCCCCC GCGGACGCUA CGCCGCGACG AGUAGGAGGG CCGCUGCGGU GAGCCUUGAA GCCUAGGGCG CGGGCC CGG GUGGAGCCGC CGCAGGUGCA GAUCUUGGUG GUAGUAGCAA AUAUUCAAAC GAGAACUUUG AAGGCCGAAG UGGAGAA GG GUUCCAUGUG AACAGCAGUU GAACAUGGGU CAGUCGGUCC UGAGAGAUGG GCGAGCGCCG UUCCGAAGGG ACGGGCGA U GGCCUCCGUU GCCCUCAGCC GAUCGAAAGG GAGUCGGGUU CAGAUCCCCG AAUCCGGAGU GGCGGAGAUG GGCGCCGCG AGGCGUCCAG UGCGGUAACG CGACCGAUCC CGGAGAAGCC GGCGGGAGCC CCGGGGAGAG UUCUCUUUUC UUUGUGAAGG GCAGGGCGC CCUGGAAUGG GUUCGCCCCG AGAGAGGGGC CCGUGCCUUG GAAAGCGUCG CGGUUCCGGC GGCGUCCGGU G AGCUCUCG CUGGCCCUUG AAAAUCCGGG GGAGAGGGUG UAAAUCUCGC GCCGGGCCGU ACCCAUAUCC GCAGCAGGUC UC CAAGGUG AACAGCCUCU GGCAUGUUGG AACAAUGUAG GUAAGGGAAG UCGGCAAGCC GGAUCCGUAA CUUCGGGAUA AGG AUUGGC UCUAAGGGCU GGGUCGGUCG GGCUGGGGCG CGAAGCGGGG CUGGGCGCGC GCCGCGGCUG GACGAGGCGC CGCC GCCCC CCCCACGCCC GGGGCGCCCU CCCCCGGCCG GGUCCGCUCC CUCGCGCGCG CGUGCGCCGU GGCGCGCGCC GCGCG CGCG GCCGAGCCCC GUCUCCCUCC CCCCCUCUCC CCUCCCGGGG CGGGGUGCGG GGAGGGGCGG GCGGGGCCGU CGCUCG CCG CGCGUGCGCG UCGCUGCGCG UGCGCCGCGC GGGGGGUCCG GCGGGCCUCC GGACGGGGGC UCCGGGCACC CGGGCAC CC GGGGGGCCGG CGGCGGCGGC GACUCUGGAC GCGAGCCGGG CCCUUCCCGU GGAUCGCCCC AGCUGCGGCG GGCGUCGC G GCCGCCCUCG GGGAGCCCGG CGGGCGCCGC GUGCGCGCGC GUGCGCGCCC GGGGUCGGGG GGGUGCGAGG CAGGGGAGG CCCUCUCUCC UCCUCCCCCA CCCCGGCGCC GCGGCGCCGC GCGUGCGCGC GCGGUCUCCC CCCGCCGGGU CCGCCCCCGG GGCCGCGGU UCCGCGCGGC GCCUCGCCUC GGCCGGCGCC UAGCAGCCGA CUUAGAACUG GUGCGGACCA GGGGAAUCCG A CUGUUUAA UUAAAACAAA GCAUCGCGAA GGCCCGCGGC GGGUGUUGAC GCGAUGUGAU UUCUGCCCAG UGCUCUGAAU GU CAAAGUG AAGAAAUUCA AUGAAGCGCG GGUAAACGGC GGGAGUAACU AUGACUCUCU UAAGGUAGCC AAAUGCCUCG UCA UCUAAU UAGUGACGCG CAUGAAUGGA UGAACGAGAU UCCCACUGUC CCUACCUACU AUCCAGCGAA ACCACAGCCA AGGG AACGG GCUUGGCGGA AUCAGCGGGG AAAGAAGACC CUGUUGAGCU UGACUCUAGU CUGGCACGGU GAAGAGACAU GAGAG GUGU AGAAUAAGUG GGAGGCCCCC GGCGCCCUCC CGCCCCCGCG AGGGGGCGGG GCGGGGUCCG CCGGCCUUGC GGGCCG CCG GUGAAAUACC ACUACUCUUA UCGUUUUUUC ACUGACCCGG UGAGGCGGGG GGGCGAGCCC CGAGGGGCUC UCGCUUC UG GCGCCAAGCG CCGGGCCCCG UCGGUCCGCG CGGGCCGGCG GCGGCCGGGC GCGACCCGCU CCGGGGACAG UGCCAGGU G GGGAGUUUGA CUGGGGCGGU ACACCUGUCA AACGGUAACG CAGGUGUCCU AAGGCGAGCU CAGGGAGGAC AGAAACCUC CCGUGGAGCA GAAGGGCAAA AGCUCGCUUG AUCUUGAUUU UCAGUACGAA UACAGACCGU GAAAGCGGGG CCUCACGAUC CUUCUGAGC UUUUGGGUUU UAAGCAGGAG GUGUCAGAAA AGUUACCACA GGGAUAACUG GCUUGUGGCG GCCAAGCGUU C AUAGCGAC GUCGCUUUUU GAUCCUUCGA UGUCGGCUCU UCCUAUCAUU GUGAAGCAGA AUUCACCAAG CGUUGGAUUG UU CACCCAC UAAUAGGGAA CGUGAGCUGG GUUUAGACCG UCGUGAGACA GGUUAGUUUU ACCCUACUGA UGAUGUGUUG UUG CCAUGG UAAUCCUGCU CAGUACGAGA GGAACCGCAG GUUCAGACAU UUGGUGUAUG UGCUUGGCUG AGGAGCCAAU GGGG CGAAG CUACCAUCUG UGGGAUUAUG ACUGAACGCC UCUAAGUCAG AAUCCCGCCC AGGCGGAACG AUACGGCAGC GCCGA AGGA GCCUCGGUUG GCCUCGGAUA GCCGGUCCCC CGCCGUCCCC GCCGGCGGCC CGCGUCGUGC GUCCGCCUCG GCGGCG UGC GGCGCGCCCC CCGCCGCGCG UCGGGACCGG GGUCCGGUGC GGAGAGCCCU UCGUCCCGGG AAAUGGGGCG CGGCCGG AA AGGGGGCCGC CCUCUCGCCC GUCACGCACC GCACGUUCGU GGGGAACCUG GCGCUAAACC AUUCGUAGAC GACCUGCU U CUGGGUCGGG GUUUCGUACG UAGCAGAGCA GCUCCCUCGC UGCGAUCUAU UGAAAGUCAG CCCUCGACAC AAGGGUUUG UAAAAAAAAA AAAAAAAAAA AAAA |
+Macromolecule #7: 5S rRNA
| Macromolecule | Name: 5S rRNA / type: rna / ID: 7 / Number of copies: 1 |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 38.691914 KDa |
| Sequence | String: GUCUACGGCC AUACCACCCU GAACGCGCCC GAUCUCGUCU GAUCUCGGAA GCUAAGCAGG GUCGGGCCUG GUUAGUACUU GGAUGGGAG ACCGCCUGGG AAUACCGGGU GCUGUAGGCU U |
+Macromolecule #8: 5.8S rRNA
| Macromolecule | Name: 5.8S rRNA / type: rna / ID: 8 / Number of copies: 1 |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 50.143648 KDa |
| Sequence | String: CGACUCUUAG CGGUGGAUCA CUCGGCUCGU GCGUCGAUGA AGAACGCAGC UAGCUGCGAG AAUUAAUGUG AAUUGCAGGA CACAUUGAU CAUCGACACU UCGAACGCAC UUGCGGCCCC GGGUUCCUCC CGGGGCUACG CCUGUCUGAG CGUCGCU GENBANK: GENBANK: OZ175204.1 |
+Macromolecule #20: 18S rRNA
| Macromolecule | Name: 18S rRNA / type: rna / ID: 20 / Number of copies: 1 |
|---|---|
| Source (natural) | Organism: ![]() |
| Molecular weight | Theoretical: 1.481846625 MDa |
| Sequence | String: GGGGGGGGGG GGGGGGGGGG GCAGUUGGGG UGGGGUGUGG CCCACCUUCG GUGAGGAAUG CCUUCUCUAG CGAUCCGAGA GAGGGGCGU GCCUUCUGAC GGGGUACCGU UAUCCCCCGG CCGCCGUCCC UCCUGUGCUG AGUGCGUUGG GUGGCGUACC C CACCCGUG ...String: GGGGGGGGGG GGGGGGGGGG GCAGUUGGGG UGGGGUGUGG CCCACCUUCG GUGAGGAAUG CCUUCUCUAG CGAUCCGAGA GAGGGGCGU GCCUUCUGAC GGGGUACCGU UAUCCCCCGG CCGCCGUCCC UCCUGUGCUG AGUGCGUUGG GUGGCGUACC C CACCCGUG UGCCCCGUUU GCCCCUUCUG UUGGGGGGAA GCGUAGGCGU GCUGGUGGGU CUGCCGGUCC CCGCGGUGGG GA CCGGGGC GCUGCUCUUU CGGCCCUAAU GGCCGCGGCC CGCGCCUCCC CCCUCCGUGU CGGGGGAGGG UCCCGCCGGG CCG GGCUGG CGGUCCGUCG CUCGCUCUUC GUGUUGGGGA CCGGCGCGCG UGCCCGUGUG CGCGCGUGCC UCCCGCGUCA CUCU CCGUG UGUUGCCUUG UCGGCCGGGG CUUGGCGGGG GCGCGCGUGG UCCGUCCUGC GCGUCCCUGG GGCUGUGGCG CGAGU GGGC AGCUCUCAGC UUCCCCUGCU CGCCACCCCG GGCUGCGACU GGCCGUUGUC GGGCGGCGGU CGGCACGUGU GUUGGG CUG GGCCCAGCCC UCUCUUCCCC CUCGGCCCGC GUGGUCGCCC CUGGGGGGAG CGUUCCCUCG GGGUCGCGGU GCUUCUC CG GGCAUGGAGA UCCGGAUGGU UGGAUGGGCG GGAGAUGGCG CGAGGGCCGU CCGGUGUGUG CGGUUGUUGG CGAUGUCG C GUGGAGGCGC CCUGGCGGCG GGGCUCUUGG GUGUGCGUGG GAGAAGACGU GGAGGGUCGC CAGAGGCGGG CUCCGGUGU CCCAGGCGUC ACGGGACCGC CCUGGUGUGU GGCGGUGGGA UCCCGUGUCC GUUUCCCCGG CGGGUCCGGC UUUCGUGGCC CAAGGCGCU CCCUGCGUCC UCUCCCUCGU GCCUCCGGUG CCUCGCCCUC CGUGGCCCUG GUGCGGCCCC CACCCCCCCU C GCUGUCGC UGCGGGCUGG GCCGUUCGCC CUCCCCCUCC GGGGGAGGGU GGGCUCUUUG AGGGCUCCGC UGCCCGCGUG CC UGUGGGG GCCUUGUGGG GUUGGGGUCU GUCCGUGACU GGUGGCGGGG GCGGGGCCGG UGGUCUUCCC CGCGUGAAGA UGC GUGUUU GGGUGGCUGU GGCUGAGGCA CGACGGCCCC CGGUUGGCUG CGUCAGGUAC UGCCUUCCCA UCCCCGCGGG ACCG CCCUU GCCUUCGGAG GGUGCCGGCG GUGAGAUCCC GCGUGUGGUG GUGGGGGUUG UGCGCUCUGG CGCGACUGGC CGGCC GGCC GGCUGCGUGG UGAGGCCCUU CCGCCCGCAC CGUCGUCGCG UGGGUGGCCC UGGUCCUUCC CCGUCGCCCU UUGCCC GCG CCUUCCUCCG CCUGCCGGGC GGCCCUGGCC CCCCGUCUCC UUUGCUCUCU UUCUCAUCCG CUUCCCGACC CGGGUCG CC GUGACCCUGC UGUGUUUCGC CUCCCCUUGG GCCGGCCCAC CGUGUCUUGG GGGUUGGGGG UUCCGGCUCC CCUUCCGC G UGUGGAACCG CCCCGGGCGG CUGUGGCGUC GCGCGUUGGC UUGUUGGCGU GCGUGGGGGA AGGAGGAGGA GGGGGAGGC GUCGUCACCC CCCCAGCUCC CCCCCCCGGU GGCGUUGGUG GCUCCGCGGC GGUGGUGGUG CUCGCGCGUG UGCCCCGAGU CCCGCGGGU GUGUCGUGGC UGGUUCCUCC GGGCCGUUGC GUCGUGGACU UGGUGUGGCG GCCGGCGUCG CGUGUGUGCG G GCGCCGGU CGGUCUGGGC GGGGUGUAGG AGGGACACUG UGAGUCGCCC UCCUUGGGUG GCGUUUGGUG UGCCCUGGUU GC CACCGCG UCCCCACCCC GAACCCCCGC GCCCGACUCC GUGCCCGCCC GGGCGGGGUG UGGCCGAGAU GGGCUCCGGC CCG CCUCGA GCCUUGCCCC GUCGGGGCGC GCUUGGACAC GAGGUGCGGU CACGACGUGA ACGACCCGCU GGUGCCGGUC CCUU CCCCC CGCUGGCUCG GGCUCGCCCU CGCGUGCCCG CCGUCGCUCG GGGUCCGCUC CGUCUGCUGG GGGUGUGUGU GUCUG UGGG GCGGGAGCCU CCGGGUCCCC CUCCUCCCGA UCUCCUCUCC CCCCUCUGCC GCCUCUGCCG CGCCCCGUCC CUGGGG UGU GUGCGGGUGA GCCGCCGGGG CUUGACCCGC UCGCGUCCGA GGACGCCCCU GAUCCCGCCG GCUCUGUCGU CCGGCUU GC UUCCCCGCGG AGGCUUGCGG CCGCGCCGCC GUGGUGCGCG CCCCGCGCCG GUUCCCGGCU UCUCUCUCGC CUGUGCGA G CGAGCGAGCG AGCGGCGGUC CCUGCCGGUC CCACCCUCUU GACCGCGCGC UCCUACCUGG UUGAUCCUGC CAGUAGCAU AUGCUUGUCU CAAAGAUUAA GCCAUGCAUG UCUAAGUACG CACGGCCGGU ACAGUGAAAC UGCGAAUGGC UCAUUAAAUC AGUUAUGGU UCCUUUGGUC GCUCGCUCCU CUCCUACUUG GAUAACUGUG GUAAUUCUAG AGCUAAUACA UGCCGACGGG C GCUGACCC CCUUCGCGGG GGGGAUGCGU GCAUUUAUCA GAUCAAAACC AACCCGGUCA GCCUCCCCCC GGCCCCGGCC GG GGGGGUG GGCGCCGGCG GCUUUGGUGA CUCUAGAUAA CCUCGGGCCG AUCGCACGCC CUCCGUGGCG GCGACGACCC AUU CGAACG UCUGCCCUAU CAACUUUCGA UGGUAGUCGC CGUGCCUACC AUGGUGACCA CGGGUGACGG GGAAUCAGGG UUCG AUUCC GGAGAGGGAG CCUGAGAAAC GGCUACCACA UCCAAGGAAG GCAGCAGGCG CGCAAAUUAC CCACUCCCGA CCCGG GGAG GUAGUGACGA AAAAUAACAA UACAGGACUC UUUCGAGGCC CUGUAAUUGG AAUGAGUCCA CUUUAAAUCC UUUAAC GAG GAUCCAUUGG AGGGCAAGUC UGGUGCCAGC AGCCGCGGUA AUUCCAGCUC CAAUAGCGUA UAUUAAAGUU GCUGCAG UU AAAAAGCUCG UAGUUGGAUC UUGGGAGCGG GCGGGCGGUC CGCCGCGAGG CGAGCCACCG CCCGUCCCCG CCCCUUGC C UCUCGGCGCC CCCUCGAUGC UCUUAGCUGA GUGUCCCGCG GGGCCCGAAG CGUUUACUUU GAAAAAAUUA GAGUGUUCA AAGCAGGCCC GAGCCGCCUG GAUACCGCAG CUAGGAAUAA UGGAAUAGGA CCGCGGUUCU AUUUUGUUGG UUUUCGGAAC UGAGGCCAU GAUUAAGAGG GACGGCCGGG GGCAUUCGUA UUGCGCCGCU AGAGGUGAAA UUCUUGGACC GGCGCAAGAC G GACCAGAG CGAAAGCAUU UGCCAAGAAU GUUUUCAUUA AUCAAGAACG AAAGUCGGAG GUUCGAAGAC GAUCAGAUAC CG UCGUAGU UCCGACCAUA AACGAUGCCG ACUGGCGAUG CGGCGGCGUU AUUCCCAUGA CCCGCCGGGC AGCUUCCGGG AAA CCAAAG UCUUUGGGUU CCGGGGGGAG UAUGGUUGCA AAGCUGAAAC UUAAAGGAAU UGACGGAAGG GCACCACCAG GAGU GGAGC CUGCGGCUUA AUUUGACCCA ACACGGGAAA CCUCACCCGG CCCGGACACG GACAGGAUUG ACAGAUUGAU AGCUC UUUC UCGAUUCCGU GGGUGGUGGU GCAUGGCCGU UCUUAGUUGG UGGAGCGAUU UGUCUGGUUA AUUCCGAUAA CGAACG AGA CUCUGGCAUG CUAACUAGUU ACGCGACCCC CGAGCGGUCG GCGUCCCCCA ACUUCUUAGA GGGACAAGUG GCGUUCA GC CACCCGAGAU UGAGCAAUAA CAGGUCUGUG AUGCCCUUAG AUGUCCGGGG CUGCACGCGC GCUACACUGA CUGGCUCA G CGUGUGCCUA CCCUACGCCG GCAGGCGCGG GUAACCCGUU GAACCCCAUU CGUGAUGGGG AUCGGGGAUU GCAAUUAUU CCCCAUGAAC GAGGAAUUCC CAGUAAGUGC GGGUCAUAAG CUUGCGUUGA UUAAGUCCCU GCCCUUUGUA CACACCGCCC GUCGCUACU ACCGAUUGGA UGGUUUAGUG AGGCCCUCGG AUCGGCCCCG CCGGGGUCGG CCCACGGCCC UGGCGGAGCG C UGAGAAGA CGGUCGAACU UGACUAUCUA GAGGAAGUAA AAGUCGUAAC AAGGUUUCCG UAGGUGAACC UGCGGAAGGA UC AUUAACG AGACCGGGCU UGGCCGGCUG GCUGUGCCCU GCCUGAUUCC GUGCCCGGGG GGGGAAGGAG AGCCCAGAGA GGG CGUGUU CCUCCCCCCU CCUCUGGCGG GCGGUGUCGA GGGUGGCUCG GGGAGUCGCC GGGGAUUGUG GCGAGGAGCG UGCG GUGUC GCGGACCGGG UUGCGUUGGG GGGUCCGGAC CCUCCCCCGC CUCCUGCGCG UGCUCGGUGG UGACCGGGGU CUGGC CGCC CUCUGGCGGU GGAGGGCCAC GGGCGUCCUC CCUGGAGGAG AGGCGAGGAG GGGUGAGGCC GAGAGGCGUG UGGCGU GCG UGGUGUGUGU GGUGGUGGGA AGAGGCGCU |
+Macromolecule #87: MAGNESIUM ION
| Macromolecule | Name: MAGNESIUM ION / type: ligand / ID: 87 / Number of copies: 291 / Formula: MG |
|---|---|
| Molecular weight | Theoretical: 24.305 Da |
+Macromolecule #88: ZINC ION
| Macromolecule | Name: ZINC ION / type: ligand / ID: 88 / Number of copies: 6 / Formula: ZN |
|---|---|
| Molecular weight | Theoretical: 65.409 Da |
-Experimental details
-Structure determination
| Method | cryo EM |
|---|---|
Processing | single particle reconstruction |
| Aggregation state | particle |
-
Sample preparation
| Buffer | pH: 7.5 |
|---|---|
| Grid | Model: Quantifoil R2/1 / Material: COPPER / Support film - Material: CARBON / Support film - topology: CONTINUOUS / Support film - Film thickness: 0.2 / Pretreatment - Type: GLOW DISCHARGE |
| Vitrification | Cryogen name: ETHANE |
-
Electron microscopy
| Microscope | TFS KRIOS |
|---|---|
| Image recording | Film or detector model: GATAN K3 (6k x 4k) / Average electron dose: 50.0 e/Å2 |
| Electron beam | Acceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN |
| Electron optics | Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 1.8 µm / Nominal defocus min: 0.8 µm |
| Experimental equipment | ![]() Model: Titan Krios / Image courtesy: FEI Company |
+
Image processing
| CTF correction | Type: NONE |
|---|---|
| Startup model | Type of model: INSILICO MODEL |
| Final reconstruction | Resolution.type: BY AUTHOR / Resolution: 2.86 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: cryoSPARC / Number images used: 15310 |
| Initial angle assignment | Type: PROJECTION MATCHING |
| Final angle assignment | Type: PROJECTION MATCHING |
+
About Yorodumi
-News
-Feb 9, 2022. New format data for meta-information of EMDB entries
New format data for meta-information of EMDB entries
- Version 3 of the EMDB header file is now the official format.
- The previous official version 1.9 will be removed from the archive.
Related info.:
EMDB header
External links:
wwPDB to switch to version 3 of the EMDB data model
-Aug 12, 2020. Covid-19 info
Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php
New page: Covid-19 featured information page in EM Navigator.
Related info.:
Covid-19 info /
Mar 5, 2020. Novel coronavirus structure data
+Mar 5, 2020. Novel coronavirus structure data
Novel coronavirus structure data
- International Committee on Taxonomy of Viruses (ICTV) defined the short name of the 2019 coronavirus as "SARS-CoV-2".
- In the structure databanks used in Yorodumi, some data are registered as the other names, "COVID-19 virus" and "2019-nCoV". Here are the details of the virus and the list of structure data.
Related info.:
Yorodumi Speices /
Aug 12, 2020. Covid-19 info
External links:
COVID-19 featured content - PDBj /
Molecule of the Month (242):Coronavirus Proteases
+Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)
EMDB accession codes are about to change! (news from PDBe EMDB page)
- The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
- The EM Navigator/Yorodumi systems omit the EMD- prefix.
Related info.:
Q: What is EMD? /
ID/Accession-code notation in Yorodumi/EM Navigator
External links:
EMDB Accession Codes are Changing Soon! /
Contact to PDBj
+Jul 12, 2017. Major update of PDB
Major update of PDB
- wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
- This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
- In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
- Now, EM Navigator and Yorodumi are based on the updated data.
External links:
wwPDB Remediation /
Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive
-Yorodumi
Thousand views of thousand structures
- Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
- This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
- The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.
Related info.:
EMDB /
PDB /
SASBDB /
Comparison of 3 databanks /
Yorodumi Search /
Aug 31, 2016. New EM Navigator & Yorodumi /
Yorodumi Papers /
Jmol/JSmol /
Function and homology information /
Changes in new EM Navigator and Yorodumi
Movie
Controller



Keywords
Authors
United States, 2 items
Citation





















Z (Sec.)
Y (Row.)
X (Col.)












































FIELD EMISSION GUN