登録情報 | データベース: EMDB / ID: EMD-33762 |
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タイトル | The cryo-EM structure of C. crescentus GcrA-TACdown |
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マップデータ | |
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試料 | - 複合体: The cryo-EM structure of C. crescentus GcrA-TACdown
- 複合体: DNA-directed RNA polymerase/RpoD/GcrA
- タンパク質・ペプチド: DNA-directed RNA polymerase subunit alpha
- タンパク質・ペプチド: DNA-directed RNA polymerase subunit beta
- タンパク質・ペプチド: DNA-directed RNA polymerase subunit beta'
- タンパク質・ペプチド: DNA-directed RNA polymerase subunit omega
- タンパク質・ペプチド: RNA polymerase sigma factor RpoD
- タンパク質・ペプチド: Cell cycle regulatory protein GcrA
- 複合体: DNA
- DNA: DNA (90-MER)-non template
- DNA: DNA (90-MER)-template
- リガンド: ZINC ION
- リガンド: MAGNESIUM ION
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キーワード | transcription activator / TRANSCRIPTION |
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機能・相同性 | 機能・相同性情報
sigma factor activity / DNA-directed RNA polymerase complex / DNA-templated transcription initiation / ribonucleoside binding / DNA-directed 5'-3' RNA polymerase activity / DNA-directed RNA polymerase / protein dimerization activity / DNA-templated transcription / magnesium ion binding / DNA binding ...sigma factor activity / DNA-directed RNA polymerase complex / DNA-templated transcription initiation / ribonucleoside binding / DNA-directed 5'-3' RNA polymerase activity / DNA-directed RNA polymerase / protein dimerization activity / DNA-templated transcription / magnesium ion binding / DNA binding / zinc ion binding / metal ion binding / cytoplasm類似検索 - 分子機能 GcrA cell cycle regulator / GcrA cell cycle regulator / RNA polymerase sigma factor 70, non-essential domain / Sigma-70, non-essential region / RNA polymerase sigma factor 70, region 1.1 / Sigma-70 factor, region 1.1 superfamily / Sigma-70 factor, region 1.1 / Sigma-70 factors family signature 1. / RNA polymerase sigma factor RpoD, C-terminal / RNA polymerase sigma factor RpoD ...GcrA cell cycle regulator / GcrA cell cycle regulator / RNA polymerase sigma factor 70, non-essential domain / Sigma-70, non-essential region / RNA polymerase sigma factor 70, region 1.1 / Sigma-70 factor, region 1.1 superfamily / Sigma-70 factor, region 1.1 / Sigma-70 factors family signature 1. / RNA polymerase sigma factor RpoD, C-terminal / RNA polymerase sigma factor RpoD / RNA polymerase sigma-70 region 1.2 / Sigma-70 factor, region 1.2 / RNA polymerase sigma-70 region 3 / Sigma-70 region 3 / Sigma-70 factors family signature 2. / RNA polymerase sigma-70 / RNA polymerase sigma-70 region 4 / Sigma-70, region 4 / RNA polymerase sigma-70 region 2 / RNA polymerase sigma-70 like domain / Sigma-70 region 2 / RNA polymerase sigma factor, region 2 / RNA polymerase sigma factor, region 3/4-like / DNA-directed RNA polymerase, omega subunit / DNA-directed RNA polymerase, subunit beta-prime, bacterial type / DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily / DNA-directed RNA polymerase, beta subunit, external 1 domain / RNA polymerase beta subunit external 1 domain / RNA polymerase, alpha subunit, C-terminal / Bacterial RNA polymerase, alpha chain C terminal domain / DNA-directed RNA polymerase, alpha subunit / DNA-directed RNA polymerase beta subunit, bacterial-type / RNA polymerase Rpb6 / RNA polymerase, subunit omega/Rpo6/RPB6 / RNA polymerase Rpb6 / RNA polymerase Rpb1, domain 3 superfamily / RNA polymerase Rpb1, clamp domain superfamily / RPB6/omega subunit-like superfamily / DNA-directed RNA polymerase, subunit beta-prime / RNA polymerase Rpb2, domain 2 superfamily / RNA polymerase Rpb1, domain 3 / RNA polymerase Rpb1, domain 3 / RNA polymerase Rpb1, domain 1 / RNA polymerase Rpb1, domain 1 / RNA polymerase, alpha subunit / RNA polymerase Rpb1, domain 4 / RNA polymerase Rpb1, domain 2 / RNA polymerase Rpb1, domain 4 / RNA polymerase, beta subunit, protrusion / RNA polymerase beta subunit / RNA polymerase, N-terminal / RNA polymerase Rpb1, funnel domain superfamily / RNA polymerase I subunit A N-terminus / RNA polymerase Rpb1, domain 5 / RNA polymerase Rpb1, domain 5 / DNA-directed RNA polymerase, insert domain / DNA-directed RNA polymerase, RpoA/D/Rpb3-type / RNA polymerase Rpb3/RpoA insert domain / RNA polymerase Rpb3/Rpb11 dimerisation domain / RNA polymerases D / DNA-directed RNA polymerase, insert domain superfamily / RNA polymerase, RBP11-like subunit / RNA polymerase Rpb2, domain 2 / RNA polymerase Rpb2, domain 2 / RNA polymerase, beta subunit, conserved site / RNA polymerase Rpb2, domain 7 / RNA polymerase Rpb2, domain 3 / RNA polymerase Rpb2, OB-fold / RNA polymerase Rpb2, domain 7 / RNA polymerase Rpb2, domain 3 / RNA polymerases beta chain signature. / DNA-directed RNA polymerase, subunit 2, hybrid-binding domain / DNA-directed RNA polymerase, subunit 2 / DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily / RNA polymerase Rpb2, domain 6 / Winged helix-like DNA-binding domain superfamily類似検索 - ドメイン・相同性 DNA-directed RNA polymerase subunit beta' / Cell cycle regulatory protein GcrA / RNA polymerase sigma factor RpoD / DNA-directed RNA polymerase subunit beta / DNA-directed RNA polymerase subunit alpha / DNA-directed RNA polymerase subunit omega類似検索 - 構成要素 |
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生物種 | Caulobacter vibrioides NA1000 (バクテリア) |
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手法 | 単粒子再構成法 / クライオ電子顕微鏡法 / 解像度: 3.8 Å |
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データ登録者 | Wu XX / Zhang Y |
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資金援助 | 中国, 2件 Organization | Grant number | 国 |
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Other government | XDB29020000 | 中国 | National Natural Science Foundation of China (NSFC) | 31870047 | 中国 |
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引用 | ジャーナル: Nucleic Acids Res. / 年: 2023 タイトル: Cryo-EM structures of Caulobacter crescentus transcription activation complex with an essential cell cycle regulator GcrA 著者: Wu XX / Zhang Y |
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履歴 | 登録 | 2022年7月5日 | - |
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ヘッダ(付随情報) 公開 | 2023年1月18日 | - |
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マップ公開 | 2023年1月18日 | - |
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更新 | 2024年7月3日 | - |
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現状 | 2024年7月3日 | 処理サイト: PDBj / 状態: 公開 |
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