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Open data
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Basic information
Entry | Database: EMDB / ID: EMD-25155 | |||||||||
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Title | Non-contracted phage G sheath | |||||||||
![]() | Non-contracted phage G sheath | |||||||||
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Biological species | ![]() | |||||||||
Method | helical reconstruction / cryo EM / Resolution: 7.0 Å | |||||||||
![]() | Gonzalez B / Li D / Li K / Hardies SC / Wright ET / Thomas JA / Serwer P / Jiang W | |||||||||
Funding support | ![]()
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![]() | ![]() Title: Structural Studies of the Phage G Tail Demonstrate an Atypical Tail Contraction Authors: Gonzalez B / Li D / Li K / Wright ET / Hardies SC / Thomas JA / Serwer P / Jiang W | |||||||||
History |
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Structure visualization
Movie |
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Structure viewer | EM map: ![]() ![]() ![]() |
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 4.1 MB | ![]() | |
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Header (meta data) | ![]() ![]() | 8.8 KB 8.8 KB | Display Display | ![]() |
Images | ![]() | 90.2 KB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Validation report
Summary document | ![]() | 332.9 KB | Display | ![]() |
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Full document | ![]() | 332.5 KB | Display | |
Data in XML | ![]() | 6.2 KB | Display | |
Data in CIF | ![]() | 7.1 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | C: citing same article ( |
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Similar structure data |
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Links
EMDB pages | ![]() ![]() |
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Map
File | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Annotation | Non-contracted phage G sheath | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Voxel size | X=Y=Z: 3.484 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Details | EMDB XML:
CCP4 map header:
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-Supplemental data
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Sample components
-Entire : Bacillus virus G
Entire | Name: ![]() |
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Components |
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-Supramolecule #1: Bacillus virus G
Supramolecule | Name: Bacillus virus G / type: virus / ID: 1 / Parent: 0 / NCBI-ID: 1084719 / Sci species name: Bacillus virus G / Virus type: VIRION / Virus isolate: SPECIES / Virus enveloped: No / Virus empty: No |
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-Experimental details
-Structure determination
Method | cryo EM |
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![]() | helical reconstruction |
Aggregation state | particle |
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Sample preparation
Buffer | pH: 7.4 |
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Vitrification | Cryogen name: ETHANE |
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Electron microscopy
Microscope | FEI TITAN KRIOS |
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Image recording | Film or detector model: GATAN K2 SUMMIT (4k x 4k) / Detector mode: SUPER-RESOLUTION / Number real images: 375 / Average electron dose: 14.5 e/Å2 |
Electron beam | Acceleration voltage: 300 kV / Electron source: ![]() |
Electron optics | Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD |
Experimental equipment | ![]() Model: Titan Krios / Image courtesy: FEI Company |
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Image processing
Final reconstruction | Applied symmetry - Helical parameters - Δz: 41.53 Å Applied symmetry - Helical parameters - Δ&Phi: 20.570 ° Applied symmetry - Helical parameters - Axial symmetry: C6 (6 fold cyclic) Resolution.type: BY AUTHOR / Resolution: 7.0 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 2099 |
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Segment selection | Number selected: 22755 / Software - Name: RELION |
Startup model | Type of model: NONE / Details: Ab-initio modeling using CryoSPARC |
Final angle assignment | Type: NOT APPLICABLE |