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- ChemComp-X8P: (tert-butyl {1-[(1-oxo-3-phenyl-1-{[3-(pyridin-3-yl-kappaN)prop-1... -

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Basic information

EntryDatabase: PDB chemical components / ID: X8P
NameName: (tert-butyl {1-[(1-oxo-3-phenyl-1-{[3-(pyridin-3-yl-kappaN)prop-1-en-1-yl]amino}propan-2-yl)sulfanyl]-3-phenylpropan-2-yl}carbamate)(6,6'-dimethyl-2,2'-bipyridine-kappa~2~N~1~,N~1'~)(1~2~,2~2~: ...Name: (tert-butyl {1-[(1-oxo-3-phenyl-1-{[3-(pyridin-3-yl-kappaN)prop-1-en-1-yl]amino}propan-2-yl)sulfanyl]-3-phenylpropan-2-yl}carbamate)(6,6'-dimethyl-2,2'-bipyridine-kappa~2~N~1~,N~1'~)(1~2~,2~2~:2~6~,3~2~-terpyridine-kappa~3~N~1^{1~},N~2^{1~},N~3^{1~})ruthenium

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Chemical information

Composition
Formula: C58H62N8O3RuS / Number of atoms: 133 / Formula weight: 1052.3 / Formal charge: 0
Others

7ksa

Type: non-polymer / PDB classification: HETAIN / Three letter code: X8P / Ideal coordinates details: Corina / Model coordinates PDB-ID: 7KSA
History
Create componentDec 3, 2020
Initial releaseJun 2, 2021
External linksUniChem / ChemSpider / PubChem / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 12.01C(C(Cc1ccccc1)NC(OC(C)(C)C)=O)SC(Cc2ccccc2)C(NCCCc3cn(ccc3)[Ru]68%11(n4c(cccc4c5n6cccc5)c7ccccn78)n9c(cccc9C)c%10cccc(n%10%11)C)=O
CACTVS 3.385[Ru].Cc1cccc(n1)c2cccc(C)n2.CC(C)(C)OC(=O)N[CH](CS[CH](Cc3ccccc3)C(=O)NCCCc4cccnc4)Cc5ccccc5.c6ccc(nc6)c7cccc(n7)c8ccccn8
OpenEye OEToolkits 2.0.7CC1=CC=CC2=[N]1[Ru]34([N]5=C(C=CC=C5)C6=[N]3C(=CC=C6)C7=CC=CC=[N]47)([N]8=C2C=CC=C8C)[N]9=CC=CC(=C9)CCCNC(=O)C(Cc1ccccc1)SCC(Cc1ccccc1)NC(=O)OC(C)(C)C

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SMILES CANONICAL

CACTVS 3.385[Ru].Cc1cccc(n1)c2cccc(C)n2.CC(C)(C)OC(=O)N[C@H](CS[C@H](Cc3ccccc3)C(=O)NCCCc4cccnc4)Cc5ccccc5.c6ccc(nc6)c7cccc(n7)c8ccccn8
OpenEye OEToolkits 2.0.7CC1=CC=CC2=[N]1[Ru]34([N]5=C(C=CC=C5)C6=[N]3C(=CC=C6)C7=CC=CC=[N]47)([N]8=C2C=CC=C8C)[N]9=CC=CC(=C9)CCCNC(=O)[C@@H](Cc1ccccc1)SC[C@H](Cc1ccccc1)NC(=O)OC(C)(C)C

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InChI

InChI 1.03InChI=1S/C31H39N3O3S.C15H11N3.C12H12N2.Ru/c1-31(2,3)37-30(36)34-27(20-24-12-6-4-7-13-24)23-38-28(21-25-14-8-5-9-15-25)29(35)33-19-11-17-26-16-10-18-32-22-26;1-3-10-16-12(6-1)14-8-5-9-15(18-14)13-7-2-4-11-17-13;1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12;/h4-10,12-16,18,22,27-28H,11,17,19-21,23H2,1-3H3,(H,33,35)(H,34,36);1-11H;3-8H,1-2H3;/t27-,28+;;;/m0.../s1

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InChIKey

InChI 1.03FVGJXMAFINABIT-VKKDUPNPSA-N

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PDB entries

Showing all 1 items

PDB-7ksa:
Crystal structure of human CYP3A4 with the caged inhibitor

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