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- ChemComp-UGF: (2~{R},3~{S},4~{R},5~{R},6~{R})-6-[[[(2~{R},3~{S},4~{R},5~{R})-5-... -

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Basic information

EntryDatabase: PDB chemical components / ID: UGF
NameName: (2~{R},3~{S},4~{R},5~{R},6~{R})-6-[[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidany
Synonyms: UDP-4-Deoxy-4-Fluoro-Glucuronic acid

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Chemical information

Composition
Formula: C15H21FN2O17P2 / Number of atoms: 58 / Formula weight: 582.276 / Formal charge: 0
Others

6z76
PDB Unreleased entry

Type: non-polymer / PDB classification: HETAIN / Three letter code: UGF / Ideal coordinates details: Corina / Model coordinates PDB-ID: 6Z76
History
Create componentJun 1, 2020
Modify synonymsJun 5, 2020
Initial releaseJul 29, 2020
External linksUniChem / ChemSpider / PubChem / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

CACTVS 3.385O[CH]1[CH](O)[CH](O[CH]([CH]1F)C(O)=O)O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O
OpenEye OEToolkits 2.0.7C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(C(O3)C(=O)O)F)O)O)O)O

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SMILES CANONICAL

CACTVS 3.385O[C@@H]1[C@@H](O)[C@H](O[C@@H]([C@H]1F)C(O)=O)O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O
OpenEye OEToolkits 2.0.7C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)C(=O)O)F)O)O)O)O

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InChI

InChI 1.03InChI=1S/C15H21FN2O17P2/c16-6-8(21)10(23)14(33-11(6)13(24)25)34-37(29,30)35-36(27,28)31-3-4-7(20)9(22)12(32-4)18-2-1-5(19)17-15(18)26/h1-2,4,6-12,14,20-23H,3H2,(H,24,25)(H,27,28)(H,29,30)(H,17,19,26)/t4-,6+,7-,8+,9-,10-,11+,12-,14-/m1/s1

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InChIKey

InChI 1.03LVBLRZZISSCAOI-CTMYAEKBSA-N

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PDB entries

Showing all 1 items

PDB-6zlj:
Crystal Structure of UDP-Glucuronic acid 4-epimerase Y149F mutant from Bacillus cereus in complex with UDP-4-DEOXY-4-FLUORO-Glucuronic acid and NAD

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