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Yorodumi- SASDGY9: Nucleolar RNA helicase 2 (DDX21) fragment 186-783 monomeric mutant -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDGY9 |
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Sample | Nucleolar RNA helicase 2 (DDX21) fragment 186-783 monomeric mutant
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Function / homology | Function and homology information RNA polymerase inhibitor activity / 7SK snRNA binding / R-loop processing / central nervous system projection neuron axonogenesis / positive regulation of myeloid dendritic cell cytokine production / B-WICH complex / miRNA binding / positive regulation of transcription by RNA polymerase III / negative regulation of transcription by RNA polymerase I / snoRNA binding ...RNA polymerase inhibitor activity / 7SK snRNA binding / R-loop processing / central nervous system projection neuron axonogenesis / positive regulation of myeloid dendritic cell cytokine production / B-WICH complex / miRNA binding / positive regulation of transcription by RNA polymerase III / negative regulation of transcription by RNA polymerase I / snoRNA binding / positive regulation of transcription by RNA polymerase I / response to exogenous dsRNA / Major pathway of rRNA processing in the nucleolus and cytosol / neuron projection maintenance / B-WICH complex positively regulates rRNA expression / microtubule cytoskeleton organization / osteoblast differentiation / rRNA processing / double-stranded RNA binding / chromosome / positive regulation of canonical NF-kappaB signal transduction / defense response to virus / transcription by RNA polymerase II / RNA helicase activity / rRNA binding / RNA helicase / chromatin remodeling / innate immune response / mRNA binding / nucleolus / positive regulation of transcription by RNA polymerase II / ATP hydrolysis activity / mitochondrion / RNA binding / nucleoplasm / ATP binding / identical protein binding / membrane / cytosol Similarity search - Function |
Biological species | Homo sapiens (human) |
Contact author |
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-Structure visualization
-Downloads & links
-Data source
SASBDB page | SASDGY9 |
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-Related structure data
Similar structure data | Similarity search - Function & homologyF&H Search |
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-External links
Related items in Molecule of the Month |
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-Models
-Sample
Sample | Name: Nucleolar RNA helicase 2 (DDX21) fragment 186-783 monomeric mutant Specimen concentration: 10 mg/ml |
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Buffer | Name: 20 mM HEPES, 500 mM NaCl, 10 % Glycerol, 2 mM TCEP / pH: 7.5 |
Entity #1961 | Name: DDX21 / Type: protein / Description: Nucleolar RNA helicase 2 / Formula weight: 69.181 / Num. of mol.: 1 / Source: Homo sapiens / References: UniProt: Q9NR30 Sequence: MGSSHHHHHH SQDPENLYFQ GAFSNFPISE ETIKLLKGRG VTFLFPIQAK TFHHVYSGKD LIAQARTGTG KTFSFAIPLI EKLHGELQDR KRGRAPQVLV LAPTRELANQ VSKDFSDITK KLSVACFYGG TPYGGQFERM RNGIDILVGT PGRIKDHIQN GKLDLTKLKH ...Sequence: MGSSHHHHHH SQDPENLYFQ GAFSNFPISE ETIKLLKGRG VTFLFPIQAK TFHHVYSGKD LIAQARTGTG KTFSFAIPLI EKLHGELQDR KRGRAPQVLV LAPTRELANQ VSKDFSDITK KLSVACFYGG TPYGGQFERM RNGIDILVGT PGRIKDHIQN GKLDLTKLKH VVLDEVDQML DMGFADQVEE ILSVAYKKDS EDNPQTLLFS ATCPHWVFNV AKKYMKSTYE QVDLIGKKTQ KTAITVEHLA IKCHWTQRAA VIGDVIRVYS GHQGRTIIFC ETKKEAQELS QNSAIKQDAQ SLHGDIPQKQ REITLKGFRN GSFGVLVATN VAARGLDIPE VDLVIQSSPP KDVESYIHRS GRTGRAGRTG VCICFYQHKE EYQLVQVEQK AGIKFKRIGV PSATEIIKAS SKDAIRLLDS VPPTAISHFK QSAEKLIEEK GAVEARRRRR RHISGATSVD QRSLINSNVG FVTMILQCSI EMPNISYAWK ELKEQLGEEI DSKVKGMVFL KGKLGVCFDV PTASVTEIQE KWHDSRRWQL SVATEQPELE GPREGYGGFR GQREGSRGFR GQRDGNRRFR GQREGSRGPR GQRSGGGNKS NRSQNKGQKR SFSKAFGQ |
-Experimental information
Beam | Instrument name: ESRF BioSAXS beamline BM29 / City: Grenoble / 国: France / Type of source: X-ray synchrotron / Wavelength: 0.099 Å / Dist. spec. to detc.: 2.867 mm | ||||||||||||||||||||||||||||||
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Detector | Name: d / Type: PILATUS 1 M, DECTRIS / Pixsize x: 0.99 mm | ||||||||||||||||||||||||||||||
Scan | Title: Nucleolar RNA helicase 2 (DDX21) fragment 186-783 monomeric mutant Measurement date: Nov 3, 2018 / Cell temperature: 20 °C / Exposure time: 1 sec. / Number of frames: 2160 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 779 /
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Result | Type of curve: sec /
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