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- SASDGL6: Ubiquitin activating enzyme 5 (UBA5_5) (Ubiquitin-like modifier-a... -

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Basic information

Entry
Database: SASBDB / ID: SASDGL6
SampleUbiquitin activating enzyme 5 (UBA5_5)
  • Ubiquitin-like modifier-activating enzyme 5 (protein), UBA5, Homo sapiens
Function / homology
Function and homology information


UFM1 activating enzyme activity / protein ufmylation / protein K69-linked ufmylation / megakaryocyte differentiation / regulation of intracellular estrogen receptor signaling pathway / reticulophagy / neuromuscular process / localization / response to endoplasmic reticulum stress / erythrocyte differentiation ...UFM1 activating enzyme activity / protein ufmylation / protein K69-linked ufmylation / megakaryocyte differentiation / regulation of intracellular estrogen receptor signaling pathway / reticulophagy / neuromuscular process / localization / response to endoplasmic reticulum stress / erythrocyte differentiation / Antigen processing: Ubiquitination & Proteasome degradation / intracellular membrane-bounded organelle / endoplasmic reticulum membrane / Golgi apparatus / protein homodimerization activity / zinc ion binding / ATP binding / nucleus / cytosol / cytoplasm
Similarity search - Function
ThiF/MoeB/HesA family / Ubiquitin-activating enzyme / THIF-type NAD/FAD binding fold / ThiF family / D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1
Similarity search - Domain/homology
Ubiquitin-like modifier-activating enzyme 5
Similarity search - Component
Biological speciesHomo sapiens (human)
Contact author
  • Sebastian Fuchs (University of Hamburg, Hamburg, Germany)

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Structure visualization

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Models

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Sample

SampleName: Ubiquitin activating enzyme 5 (UBA5_5) / Specimen concentration: 4.38 mg/ml
BufferName: 20 mM Tris, 150 mM NaCl, 2 mM DTT / pH: 7.5
Entity #1904Name: UBA5 / Type: protein / Description: Ubiquitin-like modifier-activating enzyme 5 / Formula weight: 34.194 / Num. of mol.: 2 / Source: Homo sapiens / References: UniProt: Q9GZZ9
Sequence: MGSSHHHHHH SSGLVPRGSM ALKRMGIVSD YEKIRTFAVA IVGVGGVGSV TAEMLTRCGI GKLLLFDYDK VELANMNRLF FQPHQAGLSK VQAAEHTLRN INPDVLFEVH NYNITTVENF QHFMDRISNG GLEEGKPVDL VLSCVDNFEA RMTINTACNE LGQTWMESGV ...Sequence:
MGSSHHHHHH SSGLVPRGSM ALKRMGIVSD YEKIRTFAVA IVGVGGVGSV TAEMLTRCGI GKLLLFDYDK VELANMNRLF FQPHQAGLSK VQAAEHTLRN INPDVLFEVH NYNITTVENF QHFMDRISNG GLEEGKPVDL VLSCVDNFEA RMTINTACNE LGQTWMESGV SENAVSGHIQ LIIPGESACF ACAPPLVVAA NIDEKTLKRE GVCAASLPTT MGVVAGILVQ NVLKFLLNFG TVSFYLGYNA MQDFFPTMSM KPNPQCDDRN CRKQQEEYKK KVAALPKQEV IQEEEEIIHE DNEWGIELV

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Experimental information

BeamInstrument name: PETRA III EMBL P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.123982 Å / Dist. spec. to detc.: 3 mm
DetectorName: Pilatus 6M
Scan
Title: Ubiquitin activating enzyme 5 (UBA5_5) / Measurement date: Jun 13, 2019 / Storage temperature: 15 °C / Cell temperature: 15 °C / Exposure time: 0.045 sec. / Number of frames: 49 / Unit: 1/nm /
MinMax
Q0.0613 7.3176
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 893 /
MinMax
Q0.230331 2.7027
P(R) point1 893
R0 9.8
Result
Type of curve: single_conc
ExperimentalStandardPorod
MW50 kDa65.998 kDa59.21 kDa
Volume--98.3 nm3

P(R)GuinierGuinier error
Forward scattering, I00.5378 0.54 0.0011
Radius of gyration, Rg2.96 nm2.96 nm0.11

MinMax
D-9.8
Guinier point62 137

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