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- SASDGD6: Glucuronoyl esterase S286A, deglycolsylated truncated (amino acid... -

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Open data


ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDGD6
SampleGlucuronoyl esterase S286A, deglycolsylated truncated (amino acids 95-474)
  • 4-O-methyl-glucuronoyl methylesterase (Glucuronoyl esterase, truncated) (protein), CuGE, Cerrena unicolor
Function / homology
Function and homology information


(4-O-methyl)-D-glucuronate-lignin esterase / lignin catabolic process / carboxylic ester hydrolase activity / cellulose binding / carbohydrate metabolic process / extracellular region
Similarity search - Function
CBM1 (carbohydrate binding type-1) domain signature. / Cellulose-binding domain, fungal / Cellulose-binding domain superfamily / Fungal cellulose binding domain / CBM1 (carbohydrate binding type-1) domain profile. / Fungal-type cellulose-binding domain / Alpha/Beta hydrolase fold
Similarity search - Domain/homology
4-O-methyl-glucuronoyl methylesterase
Similarity search - Component
Biological speciesCerrena unicolor (fungus)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3811
Type: atomic / Symmetry: P1 / Chi-square value: 1.054 / P-value: 0.011142

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Sample

SampleName: Glucuronoyl esterase S286A, deglycolsylated truncated (amino acids 95-474)
Specimen concentration: 3.6 mg/ml
BufferName: 20 mM sodium acetate / pH: 5
Entity #1915Name: CuGE / Type: protein
Description: 4-O-methyl-glucuronoyl methylesterase (Glucuronoyl esterase, truncated)
Formula weight: 43.178 / Num. of mol.: 1 / Source: Cerrena unicolor / References: UniProt: A0A0A7EQR3
Sequence: EAEAEFGACG AIASTVPNYN NAKLPDPFTF ANGTALRTKA DWSCRRAEIS ALIQNYEAGT LPPKPPVVTA SFSKSGNTGT LAITAGLSNS QTIKFSPTIS YPSGTPPANG WPLIIAYEGG SIPIPAGVAT LTYSNSDMAQ QNSASSRGQG LFYQLYGSTH SASAMTAWVW ...Sequence:
EAEAEFGACG AIASTVPNYN NAKLPDPFTF ANGTALRTKA DWSCRRAEIS ALIQNYEAGT LPPKPPVVTA SFSKSGNTGT LAITAGLSNS QTIKFSPTIS YPSGTPPANG WPLIIAYEGG SIPIPAGVAT LTYSNSDMAQ QNSASSRGQG LFYQLYGSTH SASAMTAWVW GVSRIIDALE MTPTAQINTQ RIGVTGCARD GKGALMAGAF EERIALTIPQ ESGSGGDACW RLSKYEIDNG NQVQDAVEIV GENVWFSTNF NNYVQKLPTV PEDHHLLAAM VAPRAMISFE NTDYLWLSPM SSFGCMTAAH TVWQGLGIAD SHGFAQVGGH AHCAWPSSLT PQLNAFINRF LLDQSATTNV FTTNNQFGKV QWNAANWITW TTPTLTENLY FQGVDHHHHH H

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Experimental information

BeamInstrument name: University of Copenhagen, Department of Drug Design and Pharmacology Xenocs BioXolver L with GeniX3D
City: Copenhagen / 国: Denmark / Type of source: X-ray in house / Wavelength: 0.154 Å / Dist. spec. to detc.: 0.571 mm
DetectorName: Pilatus3 R 300K / Type: pixel counting / Pixsize x: 172 mm
Scan
Title: Glucuronoyl esterase S286A, deglycolsylated truncated (amino acids 95-474)
Measurement date: Oct 10, 2018 / Storage temperature: 21 °C / Cell temperature: 21 °C / Exposure time: 60 sec. / Number of frames: 10 / Unit: 1/A /
MinMax
Q0.0197 0.4805
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 308 /
MinMax
Q0.0221217 0.397998
P(R) point1 308
R0 60.62
Result
Type of curve: single_conc /
ExperimentalPorod
MW35 kDa31 kDa
Volume-49.5 nm3

P(R)GuinierGuinier error
Forward scattering, I00.03734 0.037 -
Radius of gyration, Rg2.05 nm2.01 nm0.08

MinMax
D-6.06
Guinier point3 37

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