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Yorodumi- SASDGA5: The C-terminal cell-surface signaling domain of the Pseudomonas c... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDGA5 |
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Sample | The C-terminal cell-surface signaling domain of the Pseudomonas capeferrum anti-sigma regulator PupR
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Function / homology | FecR, N-terminal / Domain of unknown function (DUF4880) / FecR protein / Fe(2+)-dicitrate sensor, transmembrane component / FecR protein / sigma factor antagonist activity / PupR protein Function and homology information |
Biological species | Pseudomonas putida (bacteria) |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Data source
SASBDB page | SASDGA5 |
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-Related structure data
Similar structure data | Similarity search - Function & homologyF&H Search |
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-Models
Model #3780 | Type: atomic / Chi-square value: 1.54729964997 / P-value: 0.000262 |
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Model #3782 | Type: atomic / Chi-square value: 4.862 |
Model #3785 | Type: dummy / Software: (DAMFILT 5.0 (r4547)) / Radius of dummy atoms: 2.00 A / Chi-square value: 1.456 / P-value: 0.998201 |
-Sample
Sample | Name: The C-terminal cell-surface signaling domain of the Pseudomonas capeferrum anti-sigma regulator PupR Specimen concentration: 9.6 mg/ml |
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Buffer | Name: 25 mM HEPES 400 mM LiCl 10% v/v glycerol / pH: 7.5 |
Entity #1893 | Name: PupR / Type: protein / Description: PupR protein / Formula weight: 24.124 / Num. of mol.: 1 / Source: Pseudomonas putida / References: UniProt: Q52209 Sequence: GAMGQDWRAD YHSRIGEQRR LTLADGTQVQ LNTDSALNVA FDQQARRLRL VRGEMLITRP ALADSRPLWV DTEHGRLEST LAQFNVRLHG QHTQATVYQG SVALQPALHA YPPILLGAGE QASFNQQGLL ARQAVAAVAP AWSQGMLVAQ GQPLAAFIED LARYRRGHLA ...Sequence: GAMGQDWRAD YHSRIGEQRR LTLADGTQVQ LNTDSALNVA FDQQARRLRL VRGEMLITRP ALADSRPLWV DTEHGRLEST LAQFNVRLHG QHTQATVYQG SVALQPALHA YPPILLGAGE QASFNQQGLL ARQAVAAVAP AWSQGMLVAQ GQPLAAFIED LARYRRGHLA CDPALAGLRV SGTFPLENTD KIIAAVAETL QLEVQHFTRY WVTLKPRMA |
-Experimental information
Beam | Instrument name: Advanced Photon Source (APS), Argonne National Laboratory BioCAT 18ID City: Lemont, IL / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.103 Å / Dist. spec. to detc.: 3.5 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus3 X 1M / Pixsize x: 0.172 mm | ||||||||||||||||||||||||||||||
Scan | Title: The C-terminal cell-surface signaling domain of the Pseudomonas capeferrum anti-sigma regulator PupR Measurement date: Mar 16, 2016 / Cell temperature: 25 °C / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 972 /
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Result | Type of curve: sec /
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