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- SASDFY7: Aquifex aeolicus McoA metaloxidase (McoA) -

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Open data


ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDFY7
SampleAquifex aeolicus McoA metaloxidase
  • Aquifex aeolicus McoA metaloxidase (protein), McoA, Aquifex aeolicus
Function / homology
Function and homology information


outer membrane-bounded periplasmic space / oxidoreductase activity / copper ion binding / cell division
Similarity search - Function
Multicopper oxidase, copper-binding site / Multicopper oxidases signature 2. / Multicopper oxidase, C-terminal / Multicopper oxidase / Multicopper oxidase, type 1 / Multicopper oxidase / Multicopper oxidase / Multicopper oxidase, N-terminal / Multicopper oxidase / Cupredoxin / Prokaryotic membrane lipoprotein lipid attachment site profile.
Similarity search - Domain/homology
Periplasmic cell division protein (SufI)
Similarity search - Component
Biological speciesAquifex aeolicus (bacteria)
Contact author
  • Tiago Cordeiro (Instituto de Tecnologia Química e Biológica António Xavier, Universidade de Lisboa, Oeiras, Portugal)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3132
Type: dummy / Software: (5.0) / Radius of dummy atoms: 2.25 A / Chi-square value: 1.063 / P-value: 0.203298
Model #3133
Type: atomic / Chi-square value: 1.098 / P-value: 0.063877

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Sample

SampleName: Aquifex aeolicus McoA metaloxidase / Specimen concentration: 20 mg/ml
BufferName: 50 mM Tris-HCl, 150 mM NaCl, 2 mM TCEP / pH: 7.5
Entity #1584Name: McoA / Type: protein / Description: Aquifex aeolicus McoA metaloxidase / Formula weight: 55.468 / Num. of mol.: 1 / Source: Aquifex aeolicus / References: UniProt: O67206
Sequence: MLSKQSLNIP GYFLFPDGQR VSITAKWTTL EVIPGKSTDM LVYEIDNEYN PVIFLRKGQT FSADFVNNSG EDSIIHWHGF RAPWKSDGHP YYAVKDGETY SYPDFTIIDR SGTYFYHPHP HGRTGYQVYY GLAGMIIIED EDEDNLKQAL DLEYGVIDIP LIIQDKTFDS ...Sequence:
MLSKQSLNIP GYFLFPDGQR VSITAKWTTL EVIPGKSTDM LVYEIDNEYN PVIFLRKGQT FSADFVNNSG EDSIIHWHGF RAPWKSDGHP YYAVKDGETY SYPDFTIIDR SGTYFYHPHP HGRTGYQVYY GLAGMIIIED EDEDNLKQAL DLEYGVIDIP LIIQDKTFDS SGQLVYNPMG HMGFWGDTIL VNLTPNPYMD VERKIYRFRI LNGSNARPYR LALLRGNQRM RFWVIGVEGG LLDTPKEVNE ILVAPGERID ILVDFRDASV NDVIKLYNFP HNLIGMGMIG MRMGMGMERG MGMGNGMNMD MGMADNSEFE VMEFRVTKDS AYDKSIPQRL SEVTPINTDG AQVQRITLGM RRMVFTINGE TWEDGYANPQ DINNPKVLFE QNNGDVVIIE YVNNTGMYHP MHIHGFQFQV LERSLGPLRA TDLGWKDTVI VAPMETVRIA VDMSHPYNEH QIYLLHCHIL EHHDEGMMVN YRVNA

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Experimental information

BeamInstrument name: Diamond Light Source B21 / City: Didcot / 国: UK / Shape: 1 x 5 mm / Type of source: X-ray synchrotron / Wavelength: 0.0914 Å / Dist. spec. to detc.: 2.69 mm
DetectorName: Pilatus 2M
Scan
Title: Aquifex aeolicus McoA metaloxidase / Measurement date: Apr 15, 2019 / Storage temperature: 20 °C / Cell temperature: 20 °C / Exposure time: 3 sec. / Number of frames: 915 / Unit: 1/A /
MinMax
Q0.0036 0.4396
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 1870 /
MinMax
Q0.0126491 0.346222
P(R) point1 1870
R0 74.52
Result
Type of curve: sec /
ExperimentalPorod
MW49.5 kDa49.56 kDa
Volume-79.3 nm3

P(R)GuinierGuinier error
Forward scattering, I00.07691 0.07715 3.0E-5
Radius of gyration, Rg2.28 nm2.31 nm0.03

MinMax
D-7.45
Guinier point52 295

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