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Yorodumi- SASDFX3: Semi-synthetic nucleosome core particle (NCP) (Histone H3, H3 + H... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDFX3 |
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Sample | Semi-synthetic nucleosome core particle (NCP)
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Biological species | Xenopus laevis (African clawed frog) synthetic construct (others) |
-Structure visualization
-Downloads & links
-Data source
SASBDB page | SASDFX3 |
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-Models
-Sample
Sample | Name: Semi-synthetic nucleosome core particle (NCP) / Specimen concentration: 1.8 mg/ml / Entity id: 1520 / 1521 / 1522 / 1523 / 1524 |
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Buffer | Name: 15 mM HEPES, 200 mM NaCl / pH: 7.3 |
Entity #1520 | Name: H3 / Type: protein / Description: Histone H3 / Formula weight: 15.271 / Num. of mol.: 2 / Source: Xenopus laevis Sequence: ARTKQTARKS TGGKAPRKQL ATKAARKSAP ATGGVKKPHR YRPGTVALRE IRRYQKSTEL LIRKLPFQRL VREIAQDFKT DLRFQSSAVM ALQEASEAYL VALFEDTNLC AIHAKRVTIM PKDIQLARRI RGERA |
Entity #1521 | Name: H4 / Type: protein / Description: Histone H4 / Formula weight: 11.236 / Num. of mol.: 2 / Source: Xenopus laevis Sequence: SGRGKGGKGL GKGGAKRHRK VLRDNIQGIT KPAIRRLARR GGVKRISGLI YEETRGVLKV FLENVIRDAV TYTEHAKRKT VTAMDVVYAL KRQGRTLYGF GG |
Entity #1522 | Name: H2a / Type: protein / Description: Histone H2a / Formula weight: 13.95 / Num. of mol.: 2 / Source: Xenopus laevis Sequence: SGRGKQGGKT RAKAKTRSSR AGLQFPVGRV HRLLRKGNYA ERVGAGAPVY LAAVLEYLTA EILELAGNAA RDNKKTRIIP RHLQLAVRND EELNKLLGRV TIAQGGVLPN IQSVLLPKKT ESSKSAKSK |
Entity #1523 | Name: H2b / Type: protein / Description: Histone H2b / Formula weight: 13.494 / Num. of mol.: 2 / Source: Xenopus laevis Sequence: AKSAPAPKKG SKKAVTKTQK KDGKKRRKTR KESYAIYVYK VLKQVHPDTG ISSKAMSIMN SFVNDVFERI AGEASRLAHY NKRSTITSRE IQTAVRLLLP GELAKHAVSE GTKAVTKYTS AK |
Entity #1524 | Name: 601-147bp / Type: DNA / Description: 147bp 601 Widom sequence / Formula weight: 45.202 / Num. of mol.: 1 / Source: synthetic construct Sequence: ATCGAGAATC CCGGTGCCGA GGCCGCTCAA TTGGTCGTAG ACAGCTCTAG CACCGCTTAA ACGCACGTAC GCGCTGTCCC CCGCGTTTTA ACCGCCAAGG GGATTACTCC CTAGTCTCCA GGCACGTGTC AGATATATAC ATCCGAT |
-Experimental information
Beam | Instrument name: ESRF BM29 / City: Grenoble / 国: France / Type of source: X-ray synchrotron / Wavelength: 0.1 Å / Dist. spec. to detc.: 2.87 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 1M / Type: Dectris / Pixsize x: 172 mm | ||||||||||||||||||||||||||||||
Scan | Title: Semi-synthetic nucleosome core particle (NCP) / Measurement date: Dec 11, 2017 / Storage temperature: 4 °C / Cell temperature: 20 °C / Exposure time: 1 sec. / Number of frames: 243 / Unit: 1/nm /
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Result | Type of curve: sec /
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