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- SASDFW7: Aquifex aeolicus McoA metaloxidase deletion mutant ∆328-352 (MCo... -

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Open data


ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDFW7
SampleAquifex aeolicus McoA metaloxidase deletion mutant ∆328-352 (MCoA∆328-352)
  • Aquifex aeolicus McoA metaloxidase ∆328-352 (MCoA∆328-352) (protein), MCoA∆328-352, Aquifex aeolicus
Function / homology
Function and homology information


outer membrane-bounded periplasmic space / oxidoreductase activity / copper ion binding / cell division
Similarity search - Function
Multicopper oxidase, copper-binding site / Multicopper oxidases signature 2. / Multicopper oxidase, C-terminal / Multicopper oxidase / Multicopper oxidase / Multicopper oxidase, type 1 / Multicopper oxidase / Multicopper oxidase, N-terminal / Multicopper oxidase / Cupredoxin / Prokaryotic membrane lipoprotein lipid attachment site profile.
Similarity search - Domain/homology
Periplasmic cell division protein (SufI)
Similarity search - Component
Biological speciesAquifex aeolicus (bacteria)
Contact author
  • Tiago Cordeiro (Instituto de Tecnologia Química e Biológica António Xavier, Universidade de Lisboa, Oeiras, Portugal)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3110
Type: dummy / Software: (5.0) / Radius of dummy atoms: 2.25 A / Chi-square value: 0.993 / P-value: 0.162226
Model #3112
Type: atomic / Chi-square value: 1.050 / P-value: 0.101231

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Sample

SampleName: Aquifex aeolicus McoA metaloxidase deletion mutant ∆328-352 (MCoA∆328-352)
Specimen concentration: 12 mg/ml
BufferName: 50 mM Tris-HCl, 150 mM NaCl, 2 mM TCEP / pH: 7.5
Entity #1589Name: MCoA∆328-352 / Type: protein
Description: Aquifex aeolicus McoA metaloxidase ∆328-352 (MCoA∆328-352)
Formula weight: 52.933 / Num. of mol.: 1 / Source: Aquifex aeolicus / References: UniProt: O67206
Sequence: MLSKQSLNIP GYFLFPDGQR VSITAKWTTL EVIPGKSTDM LVYEIDNEYN PVIFLRKGQT FSADFVNNSG EDSIIHWHGF RAPWKSDGHP YYAVKDGETY SYPDFTIIDR SGTYFYHPHP HGRTGYQVYY GLAGMIIIED EDEDNLKQAL DLEYGVIDIP LIIQDKTFDS ...Sequence:
MLSKQSLNIP GYFLFPDGQR VSITAKWTTL EVIPGKSTDM LVYEIDNEYN PVIFLRKGQT FSADFVNNSG EDSIIHWHGF RAPWKSDGHP YYAVKDGETY SYPDFTIIDR SGTYFYHPHP HGRTGYQVYY GLAGMIIIED EDEDNLKQAL DLEYGVIDIP LIIQDKTFDS SGQLVYNPMG HMGFWGDTIL VNLTPNPYMD VERKIYRFRI LNGSNARPYR LALLRGNQRM RFWVIGVEGG LLDTPKEVNE ILVAPGERID ILVDFRDASV NDVIKLYNFP HNLIGMMGMA DNSEFEVMEF RVTKDSAYDK SIPQRLSEVT PINTDGAQVQ RITLGMRRMV FTINGETWED GYANPQDINN PKVLFEQNNG DVVIIEYVNN TGMYHPMHIH GFQFQVLERS LGPLRATDLG WKDTVIVAPM ETVRIAVDMS HPYNEHQIYL LHCHILEHHD EGMMVNYRVN A

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Experimental information

BeamInstrument name: ESRF BM29 / City: Grenoble / 国: France / Type of source: X-ray synchrotron / Wavelength: 0.09919 Å / Dist. spec. to detc.: 2.867 mm
DetectorName: Pilatus 1M / Type: Dectris / Pixsize x: 172 mm
Scan
Title: Aquifex aeolicus McoA metaloxidase deletion mutant ∆328-352 (MCoA∆328-352)
Measurement date: Jul 13, 2017 / Storage temperature: 20 °C / Cell temperature: 20 °C / Exposure time: 1 sec. / Number of frames: 3000 / Unit: 1/A /
MinMax
Q0.0039 0.4924
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 733 /
MinMax
Q0.0113665 0.355239
P(R) point1 733
R0 68.78
Result
Type of curve: sec /
ExperimentalPorod
MW48.3 kDa48.1 kDa
Volume-77.4 nm3

P(R)GuinierGuinier error
Forward scattering, I022.69 22.71 0.013
Radius of gyration, Rg2.24 nm2.26 nm0.01

MinMax
D-6.88
Guinier point20 114

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